Cluster: CGMR081364_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR081364
- CGC Family ID: CGCFAM_01441
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_165766 | k141_165766_35 | 38461 | 41001 | - | 3.A.7.7.1 |
| pfam | k141_165766 | k141_165766_36 | 41212 | 41700 | - | DUF494 |
| pfam | k141_165766 | k141_165766_37 | 41776 | 43017 | - | DNA_processg_A | DprA_WH |
| CAZyme | k141_165766 | k141_165766_38 | 43113 | 44264 | - | CBM50 |
Gene ID: k141_165766_35
Type: TC
Location: 38461 - 41001 (-)
Type: TC
Location: 38461 - 41001 (-)
Gene ID: k141_165766_36
Type: pfam
Location: 41212 - 41700 (-)
Type: pfam
Location: 41212 - 41700 (-)
Gene ID: k141_165766_37
Type: pfam
Location: 41776 - 43017 (-)
Type: pfam
Location: 41776 - 43017 (-)
Gene ID: k141_165766_38
Type: CAZyme
Location: 43113 - 44264 (-)
Type: CAZyme
Location: 43113 - 44264 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_C
Species
Lysobacter_C avium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.