Cluster: CGMR081364_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR081364
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_273022 | k141_273022_7 | 6860 | 7747 | + | GH23 |
| TC | k141_273022 | k141_273022_8 | 7902 | 8579 | + | 3.E.2.1.1 |
| TC | k141_273022 | k141_273022_9 | 8583 | 9842 | + | 3.D.3.1.1 |
| pfam | k141_273022 | k141_273022_10 | 9889 | 10620 | + | Cytochrom_C1 |
| TC | k141_273022 | k141_273022_11 | 10709 | 11344 | + | 1.A.12.3.1 |
Gene ID: k141_273022_7
Type: CAZyme
Location: 6860 - 7747 (+)
Type: CAZyme
Location: 6860 - 7747 (+)
Gene ID: k141_273022_8
Type: TC
Location: 7902 - 8579 (+)
Type: TC
Location: 7902 - 8579 (+)
Gene ID: k141_273022_9
Type: TC
Location: 8583 - 9842 (+)
Type: TC
Location: 8583 - 9842 (+)
Gene ID: k141_273022_10
Type: pfam
Location: 9889 - 10620 (+)
Type: pfam
Location: 9889 - 10620 (+)
Gene ID: k141_273022_11
Type: TC
Location: 10709 - 11344 (+)
Type: TC
Location: 10709 - 11344 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_C
Species
Lysobacter_C avium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.