Cluster: CGMR081364_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR081364
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_56952 | k141_56952_42 | 50377 | 53301 | - | 1.B.14.3.1 |
| pfam | k141_56952 | k141_56952_43 | 53443 | 54249 | - | TauE |
| CAZyme | k141_56952 | k141_56952_44 | 54339 | 56426 | + | GH23 |
Gene ID: k141_56952_42
Type: TC
Location: 50377 - 53301 (-)
Type: TC
Location: 50377 - 53301 (-)
Gene ID: k141_56952_43
Type: pfam
Location: 53443 - 54249 (-)
Type: pfam
Location: 53443 - 54249 (-)
Gene ID: k141_56952_44
Type: CAZyme
Location: 54339 - 56426 (+)
Type: CAZyme
Location: 54339 - 56426 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_C
Species
Lysobacter_C avium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.