Cluster: CGMR081364_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR081364
- CGC Family ID: CGCFAM_03816
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_76268 | k141_76268_4 | 2203 | 2793 | - | AA6 |
| TC | k141_76268 | k141_76268_5 | 2896 | 4164 | + | 9.B.126.2.1 |
| pfam | k141_76268 | k141_76268_6 | 4164 | 4799 | + | Thioredoxin | AhpC-TSA | Redoxin |
| CAZyme | k141_76268 | k141_76268_7 | 4809 | 6515 | - | GT41 |
Gene ID: k141_76268_4
Type: CAZyme
Location: 2203 - 2793 (-)
Type: CAZyme
Location: 2203 - 2793 (-)
Gene ID: k141_76268_5
Type: TC
Location: 2896 - 4164 (+)
Type: TC
Location: 2896 - 4164 (+)
Gene ID: k141_76268_6
Type: pfam
Location: 4164 - 4799 (+)
Type: pfam
Location: 4164 - 4799 (+)
Gene ID: k141_76268_7
Type: CAZyme
Location: 4809 - 6515 (-)
Type: CAZyme
Location: 4809 - 6515 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_C
Species
Lysobacter_C avium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.