Cluster: CGMR081364_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR081364
- CGC Family ID: CGCFAM_03206
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_189667 | k141_189667_64 | 75891 | 78146 | + | 3.A.15.3.1 |
| CAZyme | k141_189667 | k141_189667_65 | 78243 | 79139 | + | GT2 |
| pfam | k141_189667 | k141_189667_66 | 79143 | 79970 | - | OMPdecase |
| TC | k141_189667 | k141_189667_67 | 80056 | 81723 | - | 3.A.1.120.6 |
Gene ID: k141_189667_64
Type: TC
Location: 75891 - 78146 (+)
Type: TC
Location: 75891 - 78146 (+)
Gene ID: k141_189667_65
Type: CAZyme
Location: 78243 - 79139 (+)
Type: CAZyme
Location: 78243 - 79139 (+)
Gene ID: k141_189667_66
Type: pfam
Location: 79143 - 79970 (-)
Type: pfam
Location: 79143 - 79970 (-)
Gene ID: k141_189667_67
Type: TC
Location: 80056 - 81723 (-)
Type: TC
Location: 80056 - 81723 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_C
Species
Lysobacter_C avium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.