Cluster: CGMR081364_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR081364
- CGC Family ID: CGCFAM_00281
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_174913 | k141_174913_36 | 35223 | 36392 | + | 3.A.1.103.4 |
| pfam | k141_174913 | k141_174913_37 | 36392 | 37819 | + | Methyltransf_9 | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | k141_174913 | k141_174913_38 | 37816 | 40623 | + | GT2 | GT2 |
| NULL(UNKNOWN) | k141_174913 | k141_174913_39 | 40794 | 42692 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_174913 | k141_174913_40 | 42689 | 46597 | + | GT4 | GT4 |
Gene ID: k141_174913_36
Type: TC
Location: 35223 - 36392 (+)
Type: TC
Location: 35223 - 36392 (+)
Gene ID: k141_174913_37
Type: pfam
Location: 36392 - 37819 (+)
Type: pfam
Location: 36392 - 37819 (+)
Gene ID: k141_174913_38
Type: CAZyme
Location: 37816 - 40623 (+)
Type: CAZyme
Location: 37816 - 40623 (+)
Gene ID: k141_174913_39
Type:
Location: 40794 - 42692 (+)
Type:
Location: 40794 - 42692 (+)
Gene ID: k141_174913_40
Type: CAZyme
Location: 42689 - 46597 (+)
Type: CAZyme
Location: 42689 - 46597 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_C
Species
Lysobacter_C avium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.