Cluster: CGMR081364_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR081364
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_305471 | k141_305471_31 | 32153 | 33199 | + | 9.B.157.1.3 |
| TC | k141_305471 | k141_305471_32 | 33334 | 34341 | + | 9.B.157.1.3 |
| pfam | k141_305471 | k141_305471_33 | 34338 | 34823 | + | MreD |
| peptidase | k141_305471 | k141_305471_34 | 34827 | 36836 | + | X52.001 |
| TC | k141_305471 | k141_305471_35 | 36833 | 37945 | + | 2.A.103.1.2 |
| CAZyme | k141_305471 | k141_305471_36 | 38046 | 39200 | + | GH103 |
Gene ID: k141_305471_31
Type: TC
Location: 32153 - 33199 (+)
Type: TC
Location: 32153 - 33199 (+)
Gene ID: k141_305471_32
Type: TC
Location: 33334 - 34341 (+)
Type: TC
Location: 33334 - 34341 (+)
Gene ID: k141_305471_33
Type: pfam
Location: 34338 - 34823 (+)
Type: pfam
Location: 34338 - 34823 (+)
Gene ID: k141_305471_34
Type: peptidase
Location: 34827 - 36836 (+)
Type: peptidase
Location: 34827 - 36836 (+)
Gene ID: k141_305471_35
Type: TC
Location: 36833 - 37945 (+)
Type: TC
Location: 36833 - 37945 (+)
Gene ID: k141_305471_36
Type: CAZyme
Location: 38046 - 39200 (+)
Type: CAZyme
Location: 38046 - 39200 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_C
Species
Lysobacter_C avium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.