Cluster: CGMR081364_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR081364
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_266865 | k141_266865_62 | 61938 | 62729 | - | 2.A.5.5.2 |
| NULL(UNKNOWN) | k141_266865 | k141_266865_63 | 62905 | 63036 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_266865 | k141_266865_64 | 63048 | 64727 | - | SSF |
| CAZyme | k141_266865 | k141_266865_65 | 64991 | 65770 | + | GT2 |
| pfam | k141_266865 | k141_266865_66 | 65831 | 66415 | - | DUF6630 |
| TC | k141_266865 | k141_266865_67 | 66477 | 67847 | - | 2.A.1.3.60 |
| TC | k141_266865 | k141_266865_68 | 67975 | 69333 | + | 2.A.1.17.3 |
Gene ID: k141_266865_62
Type: TC
Location: 61938 - 62729 (-)
Type: TC
Location: 61938 - 62729 (-)
Gene ID: k141_266865_63
Type:
Location: 62905 - 63036 (-)
Type:
Location: 62905 - 63036 (-)
Gene ID: k141_266865_64
Type: pfam
Location: 63048 - 64727 (-)
Type: pfam
Location: 63048 - 64727 (-)
Gene ID: k141_266865_65
Type: CAZyme
Location: 64991 - 65770 (+)
Type: CAZyme
Location: 64991 - 65770 (+)
Gene ID: k141_266865_66
Type: pfam
Location: 65831 - 66415 (-)
Type: pfam
Location: 65831 - 66415 (-)
Gene ID: k141_266865_67
Type: TC
Location: 66477 - 67847 (-)
Type: TC
Location: 66477 - 67847 (-)
Gene ID: k141_266865_68
Type: TC
Location: 67975 - 69333 (+)
Type: TC
Location: 67975 - 69333 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_C
Species
Lysobacter_C avium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.