Cluster: CGMR081209_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR081209
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_8572 | k141_8572_25 | 31735 | 32208 | + | 4.A.6.1.18 |
| TC | k141_8572 | k141_8572_26 | 32218 | 33003 | + | 4.A.6.1.13 |
| TC | k141_8572 | k141_8572_27 | 33006 | 33836 | + | 4.A.6.1.13 |
| pfam | k141_8572 | k141_8572_28 | 33863 | 34261 | + | EIIA-man |
| CAZyme | k141_8572 | k141_8572_29 | 34274 | 35398 | + | GH172 |
Gene ID: k141_8572_25
Type: TC
Location: 31735 - 32208 (+)
Type: TC
Location: 31735 - 32208 (+)
Gene ID: k141_8572_26
Type: TC
Location: 32218 - 33003 (+)
Type: TC
Location: 32218 - 33003 (+)
Gene ID: k141_8572_27
Type: TC
Location: 33006 - 33836 (+)
Type: TC
Location: 33006 - 33836 (+)
Gene ID: k141_8572_28
Type: pfam
Location: 33863 - 34261 (+)
Type: pfam
Location: 33863 - 34261 (+)
Gene ID: k141_8572_29
Type: CAZyme
Location: 34274 - 35398 (+)
Type: CAZyme
Location: 34274 - 35398 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp958445065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.