Cluster: CGMR081209_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR081209
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_51985 | k141_51985_21 | 26071 | 28398 | - | 9.A.8.1.6 |
| TC | k141_51985 | k141_51985_22 | 28522 | 28743 | - | 9.A.8.1.6 |
| STP | k141_51985 | k141_51985_23 | 28783 | 29025 | - | FeoA |
| STP | k141_51985 | k141_51985_24 | 29214 | 29462 | - | PTS-HPr |
| TC | k141_51985 | k141_51985_25 | 29884 | 31347 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | k141_51985 | k141_51985_26 | 31501 | 31956 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_51985 | k141_51985_27 | 31960 | 34968 | - | GH2 |
Gene ID: k141_51985_21
Type: TC
Location: 26071 - 28398 (-)
Type: TC
Location: 26071 - 28398 (-)
Gene ID: k141_51985_22
Type: TC
Location: 28522 - 28743 (-)
Type: TC
Location: 28522 - 28743 (-)
Gene ID: k141_51985_23
Type: STP
Location: 28783 - 29025 (-)
Type: STP
Location: 28783 - 29025 (-)
Gene ID: k141_51985_24
Type: STP
Location: 29214 - 29462 (-)
Type: STP
Location: 29214 - 29462 (-)
Gene ID: k141_51985_25
Type: TC
Location: 29884 - 31347 (-)
Type: TC
Location: 29884 - 31347 (-)
Gene ID: k141_51985_26
Type:
Location: 31501 - 31956 (-)
Type:
Location: 31501 - 31956 (-)
Gene ID: k141_51985_27
Type: CAZyme
Location: 31960 - 34968 (-)
Type: CAZyme
Location: 31960 - 34968 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp958445065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.