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Cluster: CGMR081209_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_31838 k141_31838_4 2121 3584 + 2.A.3.2.3
TC k141_31838 k141_31838_5 4222 6582 + 9.A.8.1.6
TC k141_31838 k141_31838_6 6897 8561 + 4.A.1.1.3
TF k141_31838 k141_31838_7 8624 9376 - HTH_6
CAZyme k141_31838 k141_31838_8 9552 10925 + GH4
NULL(UNKNOWN) k141_31838 k141_31838_9 11091 11843 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_31838 k141_31838_10 12019 13215 + 2.A.1.2.18
CAZyme k141_31838 k141_31838_11 13369 14745 + GH13_20
Gene ID: k141_31838_4
Type: TC
Location: 2121 - 3584 (+)
Gene ID: k141_31838_5
Type: TC
Location: 4222 - 6582 (+)
Gene ID: k141_31838_6
Type: TC
Location: 6897 - 8561 (+)
Gene ID: k141_31838_7
Type: TF
Location: 8624 - 9376 (-)
Gene ID: k141_31838_8
Type: CAZyme
Location: 9552 - 10925 (+)
Gene ID: k141_31838_9
Type:
Location: 11091 - 11843 (+)
Gene ID: k141_31838_10
Type: TC
Location: 12019 - 13215 (+)
Gene ID: k141_31838_11
Type: CAZyme
Location: 13369 - 14745 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_31838_4 vegan > omnivore 1.60596 0.01057
k141_31838_8 vegan > omnivore 1.46259 0.01057
k141_31838_9 vegan > omnivore 1.58680 0.01057

🧭 Explore Read Mapping of CGC

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