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Cluster: CGMR081027_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_230663 k141_230663_12 9256 10452 - 3.A.25.1.1
pfam k141_230663 k141_230663_13 10552 11328 + SBP_bac_1 | SBP_bac_11
TC k141_230663 k141_230663_14 11325 12152 + 3.A.1.8.2
TC k141_230663 k141_230663_15 12149 13201 + 3.A.1.6.1
TC k141_230663 k141_230663_16 13252 15561 - 3.D.1.9.2
pfam k141_230663 k141_230663_17 15558 16427 - FdhD-NarQ
TC k141_230663 k141_230663_18 16505 18331 - 3.A.1.117.3
NULL(UNKNOWN) k141_230663 k141_230663_19 18441 18797 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_230663 k141_230663_20 18843 19475 - GTP_cyclohydro2
CAZyme k141_230663 k141_230663_21 19517 20299 - GT2
pfam k141_230663 k141_230663_22 20313 21335 - tRNA-synt_1b
pfam k141_230663 k141_230663_23 21444 22289 - Exo_endo_phos
TC k141_230663 k141_230663_24 22317 23525 - 9.B.126.1.3
TC k141_230663 k141_230663_25 23597 25237 + 8.A.7.1.2
NULL(UNKNOWN) k141_230663 k141_230663_26 25800 26498 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_230663 k141_230663_27 26598 27359 - 3.D.10.1.6
TC k141_230663 k141_230663_28 27376 29205 - 3.D.10.1.6
pfam k141_230663 k141_230663_29 29242 29682 - Sdh_cyt
pfam k141_230663 k141_230663_30 29703 30122 - Sdh_cyt
CAZyme k141_230663 k141_230663_31 30286 31437 - GT4
pfam k141_230663 k141_230663_32 31529 32650 + NTP_transferase | ManC_GMP_beta-helix
pfam k141_230663 k141_230663_33 32752 33858 + Bmp
TC k141_230663 k141_230663_34 33953 35458 + 3.A.1.2.17
TC k141_230663 k141_230663_35 35448 36704 + 3.A.1.2.12
TC k141_230663 k141_230663_36 36704 37993 + 3.A.1.2.17
Gene ID: k141_230663_12
Type: TC
Location: 9256 - 10452 (-)
Gene ID: k141_230663_13
Type: pfam
Location: 10552 - 11328 (+)
Gene ID: k141_230663_14
Type: TC
Location: 11325 - 12152 (+)
Gene ID: k141_230663_15
Type: TC
Location: 12149 - 13201 (+)
Gene ID: k141_230663_16
Type: TC
Location: 13252 - 15561 (-)
Gene ID: k141_230663_17
Type: pfam
Location: 15558 - 16427 (-)
Gene ID: k141_230663_18
Type: TC
Location: 16505 - 18331 (-)
Gene ID: k141_230663_19
Type:
Location: 18441 - 18797 (-)
Gene ID: k141_230663_20
Type: pfam
Location: 18843 - 19475 (-)
Gene ID: k141_230663_21
Type: CAZyme
Location: 19517 - 20299 (-)
Gene ID: k141_230663_22
Type: pfam
Location: 20313 - 21335 (-)
Gene ID: k141_230663_23
Type: pfam
Location: 21444 - 22289 (-)
Gene ID: k141_230663_24
Type: TC
Location: 22317 - 23525 (-)
Gene ID: k141_230663_25
Type: TC
Location: 23597 - 25237 (+)
Gene ID: k141_230663_26
Type:
Location: 25800 - 26498 (+)
Gene ID: k141_230663_27
Type: TC
Location: 26598 - 27359 (-)
Gene ID: k141_230663_28
Type: TC
Location: 27376 - 29205 (-)
Gene ID: k141_230663_29
Type: pfam
Location: 29242 - 29682 (-)
Gene ID: k141_230663_30
Type: pfam
Location: 29703 - 30122 (-)
Gene ID: k141_230663_31
Type: CAZyme
Location: 30286 - 31437 (-)
Gene ID: k141_230663_32
Type: pfam
Location: 31529 - 32650 (+)
Gene ID: k141_230663_33
Type: pfam
Location: 32752 - 33858 (+)
Gene ID: k141_230663_34
Type: TC
Location: 33953 - 35458 (+)
Gene ID: k141_230663_35
Type: TC
Location: 35448 - 36704 (+)
Gene ID: k141_230663_36
Type: TC
Location: 36704 - 37993 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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