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Cluster: CGMR081026_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_370446 k141_370446_11 7351 8655 - 2.A.26.1.1
sulfatase k141_370446 k141_370446_12 8821 10284 + S1_6
TC k141_370446 k141_370446_13 10715 12997 + 1.B.55.1.1
CAZyme k141_370446 k141_370446_14 13008 15032 + CE4 | GH153
CAZyme k141_370446 k141_370446_15 15145 16353 + GT2
pfam k141_370446 k141_370446_16 16350 16853 + PgaD
pfam k141_370446 k141_370446_17 16958 17449 + CsgE
TC k141_370446 k141_370446_18 17478 17900 + 1.B.48.1.1
TC k141_370446 k141_370446_19 17897 18856 + 1.B.48.1.1
Gene ID: k141_370446_11
Type: TC
Location: 7351 - 8655 (-)
Gene ID: k141_370446_12
Type: sulfatase
Location: 8821 - 10284 (+)
Gene ID: k141_370446_13
Type: TC
Location: 10715 - 12997 (+)
Gene ID: k141_370446_14
Type: CAZyme
Location: 13008 - 15032 (+)
Gene ID: k141_370446_15
Type: CAZyme
Location: 15145 - 16353 (+)
Gene ID: k141_370446_16
Type: pfam
Location: 16350 - 16853 (+)
Gene ID: k141_370446_17
Type: pfam
Location: 16958 - 17449 (+)
Gene ID: k141_370446_18
Type: TC
Location: 17478 - 17900 (+)
Gene ID: k141_370446_19
Type: TC
Location: 17897 - 18856 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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