Cluster: CGMR080803_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR080803
- CGC Family ID: CGCFAM_09046
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_309592 | k141_309592_1 | 137 | 340 | - | 3.A.1.3.23 |
| TF | k141_309592 | k141_309592_2 | 501 | 1367 | - | HTH_6 |
| CAZyme | k141_309592 | k141_309592_3 | 1501 | 2346 | - | GT2 |
| NULL(UNKNOWN) | k141_309592 | k141_309592_4 | 2453 | 3328 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_309592 | k141_309592_5 | 3793 | 5946 | - | 1.B.22.1.1 |
Gene ID: k141_309592_1
Type: TC
Location: 137 - 340 (-)
Type: TC
Location: 137 - 340 (-)
Gene ID: k141_309592_2
Type: TF
Location: 501 - 1367 (-)
Type: TF
Location: 501 - 1367 (-)
Gene ID: k141_309592_3
Type: CAZyme
Location: 1501 - 2346 (-)
Type: CAZyme
Location: 1501 - 2346 (-)
Gene ID: k141_309592_4
Type:
Location: 2453 - 3328 (-)
Type:
Location: 2453 - 3328 (-)
Gene ID: k141_309592_5
Type: TC
Location: 3793 - 5946 (-)
Type: TC
Location: 3793 - 5946 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Thiopseudomonas
Species
Thiopseudomonas sp018384595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.