Cluster: CGMR080761_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR080761
- CGC Family ID: CGCFAM_09045
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_188232 | k141_188232_52 | 55272 | 56012 | + | 3.A.1.3.4 |
| TC | k141_188232 | k141_188232_53 | 56031 | 56867 | + | 3.A.1.3.3 |
| TC | k141_188232 | k141_188232_54 | 56867 | 57508 | + | 3.A.1.3.16 |
| TC | k141_188232 | k141_188232_55 | 57525 | 58178 | + | 3.A.1.3.14 |
| TC | k141_188232 | k141_188232_56 | 58424 | 59191 | + | 1.A.16.2.1 |
| STP | k141_188232 | k141_188232_57 | 59373 | 60239 | + | GGDEF |
| NULL(UNKNOWN) | k141_188232 | k141_188232_58 | 60252 | 60404 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_188232 | k141_188232_59 | 60397 | 61695 | + | GT2 |
Gene ID: k141_188232_52
Type: TC
Location: 55272 - 56012 (+)
Type: TC
Location: 55272 - 56012 (+)
Gene ID: k141_188232_53
Type: TC
Location: 56031 - 56867 (+)
Type: TC
Location: 56031 - 56867 (+)
Gene ID: k141_188232_54
Type: TC
Location: 56867 - 57508 (+)
Type: TC
Location: 56867 - 57508 (+)
Gene ID: k141_188232_55
Type: TC
Location: 57525 - 58178 (+)
Type: TC
Location: 57525 - 58178 (+)
Gene ID: k141_188232_56
Type: TC
Location: 58424 - 59191 (+)
Type: TC
Location: 58424 - 59191 (+)
Gene ID: k141_188232_57
Type: STP
Location: 59373 - 60239 (+)
Type: STP
Location: 59373 - 60239 (+)
Gene ID: k141_188232_58
Type:
Location: 60252 - 60404 (+)
Type:
Location: 60252 - 60404 (+)
Gene ID: k141_188232_59
Type: CAZyme
Location: 60397 - 61695 (+)
Type: CAZyme
Location: 60397 - 61695 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactiplantibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.