Cluster: CGMR080761_CGC16
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR080761
- CGC Family ID: CGCFAM_02916
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_205016 | k141_205016_12 | 7987 | 9240 | - | 3.A.1.105.6 |
| TC | k141_205016 | k141_205016_13 | 9218 | 9961 | - | 3.A.1.105.10 |
| STP | k141_205016 | k141_205016_14 | 10313 | 11611 | - | PALP |
| CAZyme | k141_205016 | k141_205016_15 | 11902 | 13344 | - | GH1 |
| TC | k141_205016 | k141_205016_16 | 13696 | 14049 | - | 4.A.3.2.8 |
| TC | k141_205016 | k141_205016_17 | 14149 | 14469 | - | 4.A.3.2.4 |
| TF | k141_205016 | k141_205016_18 | 14664 | 15371 | + | GntR |
| CAZyme | k141_205016 | k141_205016_19 | 15465 | 15824 | + | GT2 |
Gene ID: k141_205016_12
Type: TC
Location: 7987 - 9240 (-)
Type: TC
Location: 7987 - 9240 (-)
Gene ID: k141_205016_13
Type: TC
Location: 9218 - 9961 (-)
Type: TC
Location: 9218 - 9961 (-)
Gene ID: k141_205016_14
Type: STP
Location: 10313 - 11611 (-)
Type: STP
Location: 10313 - 11611 (-)
Gene ID: k141_205016_15
Type: CAZyme
Location: 11902 - 13344 (-)
Type: CAZyme
Location: 11902 - 13344 (-)
Gene ID: k141_205016_16
Type: TC
Location: 13696 - 14049 (-)
Type: TC
Location: 13696 - 14049 (-)
Gene ID: k141_205016_17
Type: TC
Location: 14149 - 14469 (-)
Type: TC
Location: 14149 - 14469 (-)
Gene ID: k141_205016_18
Type: TF
Location: 14664 - 15371 (+)
Type: TF
Location: 14664 - 15371 (+)
Gene ID: k141_205016_19
Type: CAZyme
Location: 15465 - 15824 (+)
Type: CAZyme
Location: 15465 - 15824 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactiplantibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.