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Cluster: CGMR080284_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_17843 k141_17843_45 56522 57391 + 3.A.1.1.11
TC k141_17843 k141_17843_46 57399 58358 + 3.A.1.1.3
STP k141_17843 k141_17843_47 58411 60165 + SBP_bac_1
CAZyme k141_17843 k141_17843_48 60275 61780 + GH110
TF k141_17843 k141_17843_49 61800 62789 + HTH_AraC | HTH_AraC
CAZyme k141_17843 k141_17843_50 62773 65622 + GH106
sulfatase k141_17843 k141_17843_51 65672 66799 + S1_7
pfam k141_17843 k141_17843_52 66820 67659 + Lactamase_B
CAZyme k141_17843 k141_17843_53 67678 69252 + GH110
Gene ID: k141_17843_45
Type: TC
Location: 56522 - 57391 (+)
Gene ID: k141_17843_46
Type: TC
Location: 57399 - 58358 (+)
Gene ID: k141_17843_47
Type: STP
Location: 58411 - 60165 (+)
Gene ID: k141_17843_48
Type: CAZyme
Location: 60275 - 61780 (+)
Gene ID: k141_17843_49
Type: TF
Location: 61800 - 62789 (+)
Gene ID: k141_17843_50
Type: CAZyme
Location: 62773 - 65622 (+)
Gene ID: k141_17843_51
Type: sulfatase
Location: 65672 - 66799 (+)
Gene ID: k141_17843_52
Type: pfam
Location: 66820 - 67659 (+)
Gene ID: k141_17843_53
Type: CAZyme
Location: 67678 - 69252 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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