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Cluster: CGMR080284_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_78809 k141_78809_43 38804 39865 + CE4
TC k141_78809 k141_78809_44 40125 41486 + 1.A.26.1.2
pfam k141_78809 k141_78809_45 41559 42665 + APH
pfam k141_78809 k141_78809_46 42995 45001 - GtrA_DPMS_TM
CAZyme k141_78809 k141_78809_47 44988 45941 - GT2
TC k141_78809 k141_78809_48 46104 47267 - 2.A.86.1.8
NULL(UNKNOWN) k141_78809 k141_78809_49 47364 47498 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_78809 k141_78809_50 47513 48652 - 3.B.1.1.5
pfam k141_78809 k141_78809_51 49045 49902 + PBP_like_2 | PBP_like_2
TC k141_78809 k141_78809_52 49990 50874 + 3.A.1.7.5
TC k141_78809 k141_78809_53 50871 51755 + 3.A.1.7.5
TC k141_78809 k141_78809_54 51760 52509 + 3.A.1.7.5
Gene ID: k141_78809_43
Type: CAZyme
Location: 38804 - 39865 (+)
Gene ID: k141_78809_44
Type: TC
Location: 40125 - 41486 (+)
Gene ID: k141_78809_45
Type: pfam
Location: 41559 - 42665 (+)
Gene ID: k141_78809_46
Type: pfam
Location: 42995 - 45001 (-)
Gene ID: k141_78809_47
Type: CAZyme
Location: 44988 - 45941 (-)
Gene ID: k141_78809_48
Type: TC
Location: 46104 - 47267 (-)
Gene ID: k141_78809_49
Type:
Location: 47364 - 47498 (-)
Gene ID: k141_78809_50
Type: TC
Location: 47513 - 48652 (-)
Gene ID: k141_78809_51
Type: pfam
Location: 49045 - 49902 (+)
Gene ID: k141_78809_52
Type: TC
Location: 49990 - 50874 (+)
Gene ID: k141_78809_53
Type: TC
Location: 50871 - 51755 (+)
Gene ID: k141_78809_54
Type: TC
Location: 51760 - 52509 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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