dbCAN Logo

Cluster: CGMR080284_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_83397 k141_83397_56 60152 61912 - GH33
CAZyme k141_83397 k141_83397_57 61936 63594 - GH33
TF k141_83397 k141_83397_58 63697 64575 - HTH_AraC
CAZyme k141_83397 k141_83397_59 64984 67170 + GH36
STP k141_83397 k141_83397_60 67205 70048 + SBP_bac_1
TC k141_83397 k141_83397_61 70041 70967 + 3.A.1.1.4
TC k141_83397 k141_83397_62 70982 71863 + 3.A.1.1.34
pfam k141_83397 k141_83397_63 71873 73948 + Yip1
pfam k141_83397 k141_83397_64 74004 76169 + DUF5696
TC k141_83397 k141_83397_65 76162 77061 + 3.A.1.1.20
TC k141_83397 k141_83397_66 77073 77987 + 3.A.1.1.11
Gene ID: k141_83397_56
Type: CAZyme
Location: 60152 - 61912 (-)
Gene ID: k141_83397_57
Type: CAZyme
Location: 61936 - 63594 (-)
Gene ID: k141_83397_58
Type: TF
Location: 63697 - 64575 (-)
Gene ID: k141_83397_59
Type: CAZyme
Location: 64984 - 67170 (+)
Gene ID: k141_83397_60
Type: STP
Location: 67205 - 70048 (+)
Gene ID: k141_83397_61
Type: TC
Location: 70041 - 70967 (+)
Gene ID: k141_83397_62
Type: TC
Location: 70982 - 71863 (+)
Gene ID: k141_83397_63
Type: pfam
Location: 71873 - 73948 (+)
Gene ID: k141_83397_64
Type: pfam
Location: 74004 - 76169 (+)
Gene ID: k141_83397_65
Type: TC
Location: 76162 - 77061 (+)
Gene ID: k141_83397_66
Type: TC
Location: 77073 - 77987 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List