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Cluster: CGMR080284_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_224314 k141_224314_67 71323 72504 - 3.A.1.115.1
TC k141_224314 k141_224314_68 72501 73277 - 3.A.1.128.6
pfam k141_224314 k141_224314_69 73358 73735 - Ribosomal_L12 | Ribosomal_L12_N
pfam k141_224314 k141_224314_70 73775 74284 - Ribosomal_L10
TC k141_224314 k141_224314_71 74471 75700 - 2.A.37.2.2
TF k141_224314 k141_224314_72 75875 76252 + GntR
TC k141_224314 k141_224314_73 76249 77148 + 3.A.1.131.1
NULL(UNKNOWN) k141_224314 k141_224314_74 77123 78841 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_224314 k141_224314_75 78948 80600 + GH25
Gene ID: k141_224314_67
Type: TC
Location: 71323 - 72504 (-)
Gene ID: k141_224314_68
Type: TC
Location: 72501 - 73277 (-)
Gene ID: k141_224314_69
Type: pfam
Location: 73358 - 73735 (-)
Gene ID: k141_224314_70
Type: pfam
Location: 73775 - 74284 (-)
Gene ID: k141_224314_71
Type: TC
Location: 74471 - 75700 (-)
Gene ID: k141_224314_72
Type: TF
Location: 75875 - 76252 (+)
Gene ID: k141_224314_73
Type: TC
Location: 76249 - 77148 (+)
Gene ID: k141_224314_74
Type:
Location: 77123 - 78841 (+)
Gene ID: k141_224314_75
Type: CAZyme
Location: 78948 - 80600 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_224314_69 vegetarian > vegan 1.19750 0.01684
k141_224314_70 vegetarian > vegan 2.89782 0.01684

🧭 Explore Read Mapping of CGC

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