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Cluster: CGMR080284_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_186778 k141_186778_25 21308 21673 + 9.A.11.1.1
pfam k141_186778 k141_186778_26 21925 22677 + SIR2
pfam k141_186778 k141_186778_27 22798 23736 + Fic
TC k141_186778 k141_186778_28 23926 25740 + 2.A.16.2.2
TF k141_186778 k141_186778_29 25856 26596 - HTH_AraC
pfam k141_186778 k141_186778_30 26823 28619 + Fucose_iso_C | Fucose_iso_N1 | Fucose_iso_N2
CAZyme k141_186778 k141_186778_31 28679 29920 + GH29
Gene ID: k141_186778_25
Type: TC
Location: 21308 - 21673 (+)
Gene ID: k141_186778_26
Type: pfam
Location: 21925 - 22677 (+)
Gene ID: k141_186778_27
Type: pfam
Location: 22798 - 23736 (+)
Gene ID: k141_186778_28
Type: TC
Location: 23926 - 25740 (+)
Gene ID: k141_186778_29
Type: TF
Location: 25856 - 26596 (-)
Gene ID: k141_186778_30
Type: pfam
Location: 26823 - 28619 (+)
Gene ID: k141_186778_31
Type: CAZyme
Location: 28679 - 29920 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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