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Cluster: CGMR080240_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_11438 k141_11438_29 28372 29817 - GT5
STP k141_11438 k141_11438_30 30003 30809 - Response_reg | Spo0A_C
CAZyme k141_11438 k141_11438_31 31027 31593 - CE4
TC k141_11438 k141_11438_32 31726 33147 - 2.A.40.2.1
NULL(UNKNOWN) k141_11438 k141_11438_33 33240 33722 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_11438 k141_11438_34 33832 34665 - AP_endonuc_2
TC k141_11438 k141_11438_35 34658 35662 - 3.A.1.132.7
TC k141_11438 k141_11438_36 35640 36602 - 3.A.1.147.5
Gene ID: k141_11438_29
Type: CAZyme
Location: 28372 - 29817 (-)
Gene ID: k141_11438_30
Type: STP
Location: 30003 - 30809 (-)
Gene ID: k141_11438_31
Type: CAZyme
Location: 31027 - 31593 (-)
Gene ID: k141_11438_32
Type: TC
Location: 31726 - 33147 (-)
Gene ID: k141_11438_33
Type:
Location: 33240 - 33722 (-)
Gene ID: k141_11438_34
Type: pfam
Location: 33832 - 34665 (-)
Gene ID: k141_11438_35
Type: TC
Location: 34658 - 35662 (-)
Gene ID: k141_11438_36
Type: TC
Location: 35640 - 36602 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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