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Cluster: CGMR080240_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_42780 k141_42780_44 47893 48732 + GT2
CAZyme k141_42780 k141_42780_45 48742 49752 + GT2
CAZyme k141_42780 k141_42780_46 49843 50550 + GT2
pfam k141_42780 k141_42780_47 50547 50972 + DUF2304
pfam k141_42780 k141_42780_48 51110 51664 + dTDP_sugar_isom
TC k141_42780 k141_42780_49 51717 52532 + 3.A.1.104.1
TC k141_42780 k141_42780_50 52689 53903 - 2.A.27.1.3
pfam k141_42780 k141_42780_51 54143 54712 - Acetyltransf_1
TC k141_42780 k141_42780_52 55548 57164 + 3.A.1.5.38
TC k141_42780 k141_42780_53 57218 59362 + 3.A.1.5.11
TC k141_42780 k141_42780_54 59465 60337 + 3.A.1.5.23
TC k141_42780 k141_42780_55 60368 61024 + 3.A.1.5.3
Gene ID: k141_42780_44
Type: CAZyme
Location: 47893 - 48732 (+)
Gene ID: k141_42780_45
Type: CAZyme
Location: 48742 - 49752 (+)
Gene ID: k141_42780_46
Type: CAZyme
Location: 49843 - 50550 (+)
Gene ID: k141_42780_47
Type: pfam
Location: 50547 - 50972 (+)
Gene ID: k141_42780_48
Type: pfam
Location: 51110 - 51664 (+)
Gene ID: k141_42780_49
Type: TC
Location: 51717 - 52532 (+)
Gene ID: k141_42780_50
Type: TC
Location: 52689 - 53903 (-)
Gene ID: k141_42780_51
Type: pfam
Location: 54143 - 54712 (-)
Gene ID: k141_42780_52
Type: TC
Location: 55548 - 57164 (+)
Gene ID: k141_42780_53
Type: TC
Location: 57218 - 59362 (+)
Gene ID: k141_42780_54
Type: TC
Location: 59465 - 60337 (+)
Gene ID: k141_42780_55
Type: TC
Location: 60368 - 61024 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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