Cluster: CGMR080165_CGC36
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR080165
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_334523 | k141_334523_7 | 5968 | 6204 | - | 3.D.1.6.3 |
| pfam | k141_334523 | k141_334523_8 | 6358 | 6933 | + | Formyl_trans_N |
| TF | k141_334523 | k141_334523_9 | 7150 | 11199 | - | HTH_AraC |
| TC | k141_334523 | k141_334523_10 | 11523 | 14597 | + | 1.B.14.6.1 |
| TC | k141_334523 | k141_334523_11 | 14626 | 16206 | + | 8.A.46.1.6 |
| CAZyme | k141_334523 | k141_334523_12 | 16261 | 18591 | + | GH3 |
| CAZyme | k141_334523 | k141_334523_13 | 18628 | 19506 | + | CE1 |
| CAZyme | k141_334523 | k141_334523_14 | 19626 | 20834 | + | CE1 |
| CAZyme | k141_334523 | k141_334523_15 | 20844 | 21977 | + | CE1 |
| CAZyme | k141_334523 | k141_334523_16 | 21993 | 24356 | + | GH3 |
| peptidase | k141_334523 | k141_334523_17 | 24572 | 25039 | + | T03.UPW |
| peptidase | k141_334523 | k141_334523_18 | 24987 | 25901 | + | T03.UPW |
| TC | k141_334523 | k141_334523_19 | 25983 | 27878 | + | 4.C.1.1.14 |
| NULL(UNKNOWN) | k141_334523 | k141_334523_20 | 27941 | 28102 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_334523 | k141_334523_21 | 28155 | 30644 | - | 9.A.8.1.6 |
| pfam | k141_334523 | k141_334523_22 | 30798 | 32195 | + | Lyase_1 | FumaraseC_C |
| pfam | k141_334523 | k141_334523_23 | 32372 | 34012 | + | Fumerase | Fumerase_C |
| CAZyme | k141_334523 | k141_334523_24 | 34139 | 36688 | + | GH2 |
Gene ID: k141_334523_7
Type: TC
Location: 5968 - 6204 (-)
Type: TC
Location: 5968 - 6204 (-)
Gene ID: k141_334523_8
Type: pfam
Location: 6358 - 6933 (+)
Type: pfam
Location: 6358 - 6933 (+)
Gene ID: k141_334523_9
Type: TF
Location: 7150 - 11199 (-)
Type: TF
Location: 7150 - 11199 (-)
Gene ID: k141_334523_10
Type: TC
Location: 11523 - 14597 (+)
Type: TC
Location: 11523 - 14597 (+)
Gene ID: k141_334523_11
Type: TC
Location: 14626 - 16206 (+)
Type: TC
Location: 14626 - 16206 (+)
Gene ID: k141_334523_12
Type: CAZyme
Location: 16261 - 18591 (+)
Type: CAZyme
Location: 16261 - 18591 (+)
Gene ID: k141_334523_13
Type: CAZyme
Location: 18628 - 19506 (+)
Type: CAZyme
Location: 18628 - 19506 (+)
Gene ID: k141_334523_14
Type: CAZyme
Location: 19626 - 20834 (+)
Type: CAZyme
Location: 19626 - 20834 (+)
Gene ID: k141_334523_15
Type: CAZyme
Location: 20844 - 21977 (+)
Type: CAZyme
Location: 20844 - 21977 (+)
Gene ID: k141_334523_16
Type: CAZyme
Location: 21993 - 24356 (+)
Type: CAZyme
Location: 21993 - 24356 (+)
Gene ID: k141_334523_17
Type: peptidase
Location: 24572 - 25039 (+)
Type: peptidase
Location: 24572 - 25039 (+)
Gene ID: k141_334523_18
Type: peptidase
Location: 24987 - 25901 (+)
Type: peptidase
Location: 24987 - 25901 (+)
Gene ID: k141_334523_19
Type: TC
Location: 25983 - 27878 (+)
Type: TC
Location: 25983 - 27878 (+)
Gene ID: k141_334523_20
Type:
Location: 27941 - 28102 (-)
Type:
Location: 27941 - 28102 (-)
Gene ID: k141_334523_21
Type: TC
Location: 28155 - 30644 (-)
Type: TC
Location: 28155 - 30644 (-)
Gene ID: k141_334523_22
Type: pfam
Location: 30798 - 32195 (+)
Type: pfam
Location: 30798 - 32195 (+)
Gene ID: k141_334523_23
Type: pfam
Location: 32372 - 34012 (+)
Type: pfam
Location: 32372 - 34012 (+)
Gene ID: k141_334523_24
Type: CAZyme
Location: 34139 - 36688 (+)
Type: CAZyme
Location: 34139 - 36688 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Proteiniphilum
Species
Proteiniphilum sp012837345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.