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Cluster: CGMR080165_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_13632 k141_13632_10 10740 13757 + 1.B.14.6.1
TC k141_13632 k141_13632_11 13770 15413 + 8.A.46.1.1
pfam k141_13632 k141_13632_12 15428 16570 + SusE | SusF_SusE
pfam k141_13632 k141_13632_13 16633 18054 + SusF_SusE | SusF_N
CAZyme k141_13632 k141_13632_14 18117 19151 + GH53
CAZyme k141_13632 k141_13632_15 19231 21063 + GH13_46
CAZyme k141_13632 k141_13632_16 21112 23466 + GH13_10
pfam k141_13632 k141_13632_17 23615 24121 + Flavodoxin_1
CAZyme k141_13632 k141_13632_18 24193 25548 - GH13
TC k141_13632 k141_13632_19 25563 27221 - 2.A.2.6.3
Gene ID: k141_13632_10
Type: TC
Location: 10740 - 13757 (+)
Gene ID: k141_13632_11
Type: TC
Location: 13770 - 15413 (+)
Gene ID: k141_13632_12
Type: pfam
Location: 15428 - 16570 (+)
Gene ID: k141_13632_13
Type: pfam
Location: 16633 - 18054 (+)
Gene ID: k141_13632_14
Type: CAZyme
Location: 18117 - 19151 (+)
Gene ID: k141_13632_15
Type: CAZyme
Location: 19231 - 21063 (+)
Gene ID: k141_13632_16
Type: CAZyme
Location: 21112 - 23466 (+)
Gene ID: k141_13632_17
Type: pfam
Location: 23615 - 24121 (+)
Gene ID: k141_13632_18
Type: CAZyme
Location: 24193 - 25548 (-)
Gene ID: k141_13632_19
Type: TC
Location: 25563 - 27221 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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