Cluster: CGMR080165_CGC20
🧬 Cluster Details
- Gene Count: 28
- CAZyme Count: 17
- Substrate:
- Genome ID: CGMR080165
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_218855 | k141_218855_9 | 9617 | 10849 | + | GH105 |
| CAZyme | k141_218855 | k141_218855_10 | 10846 | 13632 | + | GH106 |
| TF | k141_218855 | k141_218855_11 | 13646 | 14713 | - | LacI |
| TF | k141_218855 | k141_218855_12 | 14823 | 15884 | - | LacI |
| CAZyme | k141_218855 | k141_218855_13 | 16183 | 18258 | + | GH42 |
| CAZyme | k141_218855 | k141_218855_14 | 18439 | 21081 | + | GH3 |
| TC | k141_218855 | k141_218855_15 | 21606 | 24683 | + | 1.B.14.6.1 |
| pfam | k141_218855 | k141_218855_16 | 24716 | 26392 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_218855 | k141_218855_17 | 26411 | 27814 | + | SGBP_B_XBD |
| CAZyme | k141_218855 | k141_218855_18 | 27855 | 30197 | + | GH10 |
| CAZyme | k141_218855 | k141_218855_19 | 30426 | 31583 | + | CE1 |
| peptidase | k141_218855 | k141_218855_20 | 31623 | 32543 | + | S09.UPW |
| NULL(UNKNOWN) | k141_218855 | k141_218855_21 | 32556 | 33290 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_218855 | k141_218855_22 | 33299 | 34759 | + | GH43_7 | GH43_7 |
| CAZyme | k141_218855 | k141_218855_23 | 34815 | 35819 | + | GH43_29 |
| CAZyme | k141_218855 | k141_218855_24 | 35859 | 36983 | - | GH43_17 |
| TF | k141_218855 | k141_218855_25 | 37279 | 41517 | + | HTH_AraC |
| CAZyme | k141_218855 | k141_218855_26 | 41591 | 42898 | - | CBM6 | GH43_2 |
| TC | k141_218855 | k141_218855_27 | 43417 | 46533 | + | 1.B.14.6.1 |
| pfam | k141_218855 | k141_218855_28 | 46551 | 48230 | + | SusD_RagB |
| CAZyme | k141_218855 | k141_218855_29 | 48362 | 49591 | + | CE1 |
| CAZyme | k141_218855 | k141_218855_30 | 49956 | 51083 | + | GH10 |
| CAZyme | k141_218855 | k141_218855_31 | 51365 | 52951 | + | CBM91 | GH43_10 |
| CAZyme | k141_218855 | k141_218855_32 | 53046 | 54275 | + | GH8 |
| CAZyme | k141_218855 | k141_218855_33 | 54284 | 56836 | + | GH115 |
| CAZyme | k141_218855 | k141_218855_34 | 56887 | 59763 | + | CE6 | GH43_35 |
| CAZyme | k141_218855 | k141_218855_35 | 59863 | 62286 | + | GH95 |
| TC | k141_218855 | k141_218855_36 | 62331 | 63263 | + | 8.A.5.1.6 |
Gene ID: k141_218855_9
Type: CAZyme
Location: 9617 - 10849 (+)
Type: CAZyme
Location: 9617 - 10849 (+)
Gene ID: k141_218855_10
Type: CAZyme
Location: 10846 - 13632 (+)
Type: CAZyme
Location: 10846 - 13632 (+)
Gene ID: k141_218855_11
Type: TF
Location: 13646 - 14713 (-)
Type: TF
Location: 13646 - 14713 (-)
Gene ID: k141_218855_12
Type: TF
Location: 14823 - 15884 (-)
Type: TF
Location: 14823 - 15884 (-)
Gene ID: k141_218855_13
Type: CAZyme
Location: 16183 - 18258 (+)
Type: CAZyme
Location: 16183 - 18258 (+)
Gene ID: k141_218855_14
Type: CAZyme
Location: 18439 - 21081 (+)
Type: CAZyme
Location: 18439 - 21081 (+)
Gene ID: k141_218855_15
Type: TC
Location: 21606 - 24683 (+)
Type: TC
Location: 21606 - 24683 (+)
Gene ID: k141_218855_16
Type: pfam
Location: 24716 - 26392 (+)
Type: pfam
Location: 24716 - 26392 (+)
Gene ID: k141_218855_17
Type: pfam
Location: 26411 - 27814 (+)
Type: pfam
Location: 26411 - 27814 (+)
Gene ID: k141_218855_18
Type: CAZyme
Location: 27855 - 30197 (+)
Type: CAZyme
Location: 27855 - 30197 (+)
Gene ID: k141_218855_19
Type: CAZyme
Location: 30426 - 31583 (+)
Type: CAZyme
Location: 30426 - 31583 (+)
Gene ID: k141_218855_20
Type: peptidase
Location: 31623 - 32543 (+)
Type: peptidase
Location: 31623 - 32543 (+)
Gene ID: k141_218855_21
Type:
Location: 32556 - 33290 (+)
Type:
Location: 32556 - 33290 (+)
Gene ID: k141_218855_22
Type: CAZyme
Location: 33299 - 34759 (+)
Type: CAZyme
Location: 33299 - 34759 (+)
Gene ID: k141_218855_23
Type: CAZyme
Location: 34815 - 35819 (+)
Type: CAZyme
Location: 34815 - 35819 (+)
Gene ID: k141_218855_24
Type: CAZyme
Location: 35859 - 36983 (-)
Type: CAZyme
Location: 35859 - 36983 (-)
Gene ID: k141_218855_25
Type: TF
Location: 37279 - 41517 (+)
Type: TF
Location: 37279 - 41517 (+)
Gene ID: k141_218855_26
Type: CAZyme
Location: 41591 - 42898 (-)
Type: CAZyme
Location: 41591 - 42898 (-)
Gene ID: k141_218855_27
Type: TC
Location: 43417 - 46533 (+)
Type: TC
Location: 43417 - 46533 (+)
Gene ID: k141_218855_28
Type: pfam
Location: 46551 - 48230 (+)
Type: pfam
Location: 46551 - 48230 (+)
Gene ID: k141_218855_29
Type: CAZyme
Location: 48362 - 49591 (+)
Type: CAZyme
Location: 48362 - 49591 (+)
Gene ID: k141_218855_30
Type: CAZyme
Location: 49956 - 51083 (+)
Type: CAZyme
Location: 49956 - 51083 (+)
Gene ID: k141_218855_31
Type: CAZyme
Location: 51365 - 52951 (+)
Type: CAZyme
Location: 51365 - 52951 (+)
Gene ID: k141_218855_32
Type: CAZyme
Location: 53046 - 54275 (+)
Type: CAZyme
Location: 53046 - 54275 (+)
Gene ID: k141_218855_33
Type: CAZyme
Location: 54284 - 56836 (+)
Type: CAZyme
Location: 54284 - 56836 (+)
Gene ID: k141_218855_34
Type: CAZyme
Location: 56887 - 59763 (+)
Type: CAZyme
Location: 56887 - 59763 (+)
Gene ID: k141_218855_35
Type: CAZyme
Location: 59863 - 62286 (+)
Type: CAZyme
Location: 59863 - 62286 (+)
Gene ID: k141_218855_36
Type: TC
Location: 62331 - 63263 (+)
Type: TC
Location: 62331 - 63263 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Proteiniphilum
Species
Proteiniphilum sp012837345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.