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Cluster: CGMR080165_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_125813 k141_125813_3 1124 2848 + CBM91 | GH43_12
CAZyme k141_125813 k141_125813_4 2903 4069 + CE1
CAZyme k141_125813 k141_125813_5 4096 5319 + CE1
CAZyme k141_125813 k141_125813_6 5379 6764 + CBM6 | GH43_29
CAZyme k141_125813 k141_125813_7 6827 8770 + GH97
CAZyme k141_125813 k141_125813_8 8869 11247 + GH146
pfam k141_125813 k141_125813_9 11300 12223 + PETase
CAZyme k141_125813 k141_125813_10 12223 13602 + CBM6 | GH43_29
CAZyme k141_125813 k141_125813_11 13617 16097 + GH31_4
CAZyme k141_125813 k141_125813_12 16176 17384 + CE15
TC k141_125813 k141_125813_13 18040 21090 + 1.B.14.6.1
pfam k141_125813 k141_125813_14 21127 23061 + SusD_RagB | SusD-like_3
TC k141_125813 k141_125813_15 23479 24891 + 2.A.2.3.2
CAZyme k141_125813 k141_125813_16 24924 26060 + GH10
CAZyme k141_125813 k141_125813_17 26081 27055 + GH43_1
CAZyme k141_125813 k141_125813_18 27055 29181 + GH67
Gene ID: k141_125813_3
Type: CAZyme
Location: 1124 - 2848 (+)
Gene ID: k141_125813_4
Type: CAZyme
Location: 2903 - 4069 (+)
Gene ID: k141_125813_5
Type: CAZyme
Location: 4096 - 5319 (+)
Gene ID: k141_125813_6
Type: CAZyme
Location: 5379 - 6764 (+)
Gene ID: k141_125813_7
Type: CAZyme
Location: 6827 - 8770 (+)
Gene ID: k141_125813_8
Type: CAZyme
Location: 8869 - 11247 (+)
Gene ID: k141_125813_9
Type: pfam
Location: 11300 - 12223 (+)
Gene ID: k141_125813_10
Type: CAZyme
Location: 12223 - 13602 (+)
Gene ID: k141_125813_11
Type: CAZyme
Location: 13617 - 16097 (+)
Gene ID: k141_125813_12
Type: CAZyme
Location: 16176 - 17384 (+)
Gene ID: k141_125813_13
Type: TC
Location: 18040 - 21090 (+)
Gene ID: k141_125813_14
Type: pfam
Location: 21127 - 23061 (+)
Gene ID: k141_125813_15
Type: TC
Location: 23479 - 24891 (+)
Gene ID: k141_125813_16
Type: CAZyme
Location: 24924 - 26060 (+)
Gene ID: k141_125813_17
Type: CAZyme
Location: 26081 - 27055 (+)
Gene ID: k141_125813_18
Type: CAZyme
Location: 27055 - 29181 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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