Cluster: CGMR079934_CGC87
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 12
- Substrate:
- Genome ID: CGMR079934
- CGC Family ID: CGCFAM_04405
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_22249 | k141_22249_14 | 14659 | 15645 | - | GH43_31 |
| CAZyme | k141_22249 | k141_22249_15 | 15965 | 17773 | - | GH2 |
| CAZyme | k141_22249 | k141_22249_16 | 17819 | 19852 | - | GH182 |
| CAZyme | k141_22249 | k141_22249_17 | 20230 | 21333 | - | GH105 |
| CAZyme | k141_22249 | k141_22249_18 | 21382 | 22530 | - | GH130_3 |
| pfam | k141_22249 | k141_22249_19 | 22569 | 23960 | - | FAD_binding_2 | GIDA | Pyr_redox_2 | FAD_oxidored | NAD_binding_8 |
| CAZyme | k141_22249 | k141_22249_20 | 24065 | 26776 | - | GH2 |
| CAZyme | k141_22249 | k141_22249_21 | 26919 | 28016 | - | GH105 |
| CAZyme | k141_22249 | k141_22249_22 | 28050 | 29702 | - | GH105 |
| CAZyme | k141_22249 | k141_22249_23 | 29714 | 31261 | - | GH76 |
| CAZyme | k141_22249 | k141_22249_24 | 31282 | 32568 | - | GH43_31 |
| pfam | k141_22249 | k141_22249_25 | 32779 | 33840 | - | BT_3987-like_N | BT_3044-like_C | DUF4973 |
| pfam | k141_22249 | k141_22249_26 | 33890 | 35986 | - | SusD_RagB | SusD-like_3 |
| TC | k141_22249 | k141_22249_27 | 36002 | 39076 | - | 1.B.14.6.1 |
| pfam | k141_22249 | k141_22249_28 | 39098 | 40603 | - | TIG |
| NULL(UNKNOWN) | k141_22249 | k141_22249_29 | 40648 | 40911 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_22249 | k141_22249_30 | 41056 | 42954 | - | GH43_3 |
| NULL(UNKNOWN) | k141_22249 | k141_22249_31 | 43094 | 43273 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_22249 | k141_22249_32 | 43401 | 46115 | + | GH63 |
Gene ID: k141_22249_14
Type: CAZyme
Location: 14659 - 15645 (-)
Type: CAZyme
Location: 14659 - 15645 (-)
Gene ID: k141_22249_15
Type: CAZyme
Location: 15965 - 17773 (-)
Type: CAZyme
Location: 15965 - 17773 (-)
Gene ID: k141_22249_16
Type: CAZyme
Location: 17819 - 19852 (-)
Type: CAZyme
Location: 17819 - 19852 (-)
Gene ID: k141_22249_17
Type: CAZyme
Location: 20230 - 21333 (-)
Type: CAZyme
Location: 20230 - 21333 (-)
Gene ID: k141_22249_18
Type: CAZyme
Location: 21382 - 22530 (-)
Type: CAZyme
Location: 21382 - 22530 (-)
Gene ID: k141_22249_19
Type: pfam
Location: 22569 - 23960 (-)
Type: pfam
Location: 22569 - 23960 (-)
Gene ID: k141_22249_20
Type: CAZyme
Location: 24065 - 26776 (-)
Type: CAZyme
Location: 24065 - 26776 (-)
Gene ID: k141_22249_21
Type: CAZyme
Location: 26919 - 28016 (-)
Type: CAZyme
Location: 26919 - 28016 (-)
Gene ID: k141_22249_22
Type: CAZyme
Location: 28050 - 29702 (-)
Type: CAZyme
Location: 28050 - 29702 (-)
Gene ID: k141_22249_23
Type: CAZyme
Location: 29714 - 31261 (-)
Type: CAZyme
Location: 29714 - 31261 (-)
Gene ID: k141_22249_24
Type: CAZyme
Location: 31282 - 32568 (-)
Type: CAZyme
Location: 31282 - 32568 (-)
Gene ID: k141_22249_25
Type: pfam
Location: 32779 - 33840 (-)
Type: pfam
Location: 32779 - 33840 (-)
Gene ID: k141_22249_26
Type: pfam
Location: 33890 - 35986 (-)
Type: pfam
Location: 33890 - 35986 (-)
Gene ID: k141_22249_27
Type: TC
Location: 36002 - 39076 (-)
Type: TC
Location: 36002 - 39076 (-)
Gene ID: k141_22249_28
Type: pfam
Location: 39098 - 40603 (-)
Type: pfam
Location: 39098 - 40603 (-)
Gene ID: k141_22249_29
Type:
Location: 40648 - 40911 (-)
Type:
Location: 40648 - 40911 (-)
Gene ID: k141_22249_30
Type: CAZyme
Location: 41056 - 42954 (-)
Type: CAZyme
Location: 41056 - 42954 (-)
Gene ID: k141_22249_31
Type:
Location: 43094 - 43273 (-)
Type:
Location: 43094 - 43273 (-)
Gene ID: k141_22249_32
Type: CAZyme
Location: 43401 - 46115 (+)
Type: CAZyme
Location: 43401 - 46115 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_22249_16 | vegan > omnivore | 1.01176 | 0.01667 |
| k141_22249_20 | vegan > omnivore | 1.76204 | 0.01667 |
| k141_22249_32 | vegan > omnivore | 1.43075 | 0.02966 |