Cluster: CGMR079934_CGC75
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR079934
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_19467 | k141_19467_19 | 17964 | 19481 | - | 2.A.17.1.7 |
| pfam | k141_19467 | k141_19467_20 | 19557 | 20036 | - | tRNA_edit |
| pfam | k141_19467 | k141_19467_21 | 20141 | 22981 | - | UvrA_DNA-bind | UvrA_inter |
| CAZyme | k141_19467 | k141_19467_22 | 23124 | 24890 | + | CBM50 | CBM50 | CBM50 |
Gene ID: k141_19467_19
Type: TC
Location: 17964 - 19481 (-)
Type: TC
Location: 17964 - 19481 (-)
Gene ID: k141_19467_20
Type: pfam
Location: 19557 - 20036 (-)
Type: pfam
Location: 19557 - 20036 (-)
Gene ID: k141_19467_21
Type: pfam
Location: 20141 - 22981 (-)
Type: pfam
Location: 20141 - 22981 (-)
Gene ID: k141_19467_22
Type: CAZyme
Location: 23124 - 24890 (+)
Type: CAZyme
Location: 23124 - 24890 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_19467_20 | vegan > omnivore | 1.20284 | 0.00843 |