Cluster: CGMR079934_CGC65
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate: host glycan
- Genome ID: CGMR079934
- CGC Family ID: CGCFAM_00479
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_31810 | k141_31810_47 | 80844 | 81866 | - | GH18 |
| TC | k141_31810 | k141_31810_48 | 81893 | 83476 | - | 8.A.46.2.1 |
| TC | k141_31810 | k141_31810_49 | 83485 | 86247 | - | 1.B.14.6.13 |
| pfam | k141_31810 | k141_31810_50 | 86512 | 87693 | - | BT_3987-like_N | Laminin_G_3 |
| CAZyme | k141_31810 | k141_31810_51 | 87712 | 88806 | - | GH18 |
| TC | k141_31810 | k141_31810_52 | 88838 | 90478 | - | 8.A.46.2.2 |
| TC | k141_31810 | k141_31810_53 | 90499 | 93792 | - | 1.B.14.6.13 |
| NULL(UNKNOWN) | k141_31810 | k141_31810_54 | 93927 | 94025 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_31810 | k141_31810_55 | 94161 | 95402 | + | Phage_integrase | Phage_int_SAM_5 | Arm-DNA-bind_5 |
| TC | k141_31810 | k141_31810_56 | 96204 | 98951 | + | 1.B.14.6.13 |
| TC | k141_31810 | k141_31810_57 | 98970 | 100511 | + | 8.A.46.2.1 |
| CAZyme | k141_31810 | k141_31810_58 | 100536 | 101663 | + | GH18 |
| pfam | k141_31810 | k141_31810_59 | 101670 | 102851 | + | BT_3987-like_N | Laminin_G_3 |
| pfam | k141_31810 | k141_31810_60 | 102904 | 103776 | + | F5_F8_type_C | DUF4999 | F5_F8_type_C_2 |
| CAZyme | k141_31810 | k141_31810_61 | 103903 | 106224 | + | GH20 |
Gene ID: k141_31810_47
Type: CAZyme
Location: 80844 - 81866 (-)
Type: CAZyme
Location: 80844 - 81866 (-)
Gene ID: k141_31810_48
Type: TC
Location: 81893 - 83476 (-)
Type: TC
Location: 81893 - 83476 (-)
Gene ID: k141_31810_49
Type: TC
Location: 83485 - 86247 (-)
Type: TC
Location: 83485 - 86247 (-)
Gene ID: k141_31810_50
Type: pfam
Location: 86512 - 87693 (-)
Type: pfam
Location: 86512 - 87693 (-)
Gene ID: k141_31810_51
Type: CAZyme
Location: 87712 - 88806 (-)
Type: CAZyme
Location: 87712 - 88806 (-)
Gene ID: k141_31810_52
Type: TC
Location: 88838 - 90478 (-)
Type: TC
Location: 88838 - 90478 (-)
Gene ID: k141_31810_53
Type: TC
Location: 90499 - 93792 (-)
Type: TC
Location: 90499 - 93792 (-)
Gene ID: k141_31810_54
Type:
Location: 93927 - 94025 (+)
Type:
Location: 93927 - 94025 (+)
Gene ID: k141_31810_55
Type: pfam
Location: 94161 - 95402 (+)
Type: pfam
Location: 94161 - 95402 (+)
Gene ID: k141_31810_56
Type: TC
Location: 96204 - 98951 (+)
Type: TC
Location: 96204 - 98951 (+)
Gene ID: k141_31810_57
Type: TC
Location: 98970 - 100511 (+)
Type: TC
Location: 98970 - 100511 (+)
Gene ID: k141_31810_58
Type: CAZyme
Location: 100536 - 101663 (+)
Type: CAZyme
Location: 100536 - 101663 (+)
Gene ID: k141_31810_59
Type: pfam
Location: 101670 - 102851 (+)
Type: pfam
Location: 101670 - 102851 (+)
Gene ID: k141_31810_60
Type: pfam
Location: 102904 - 103776 (+)
Type: pfam
Location: 102904 - 103776 (+)
Gene ID: k141_31810_61
Type: CAZyme
Location: 103903 - 106224 (+)
Type: CAZyme
Location: 103903 - 106224 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_31810_54 | vegan > omnivore | 1.09640 | 0.00936 |
| k141_31810_55 | vegan > omnivore | 1.00734 | 0.01667 |