Cluster: CGMR079934_CGC64
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 9
- Substrate: arabinogalactan/pectin
- Genome ID: CGMR079934
- CGC Family ID: CGCFAM_00212
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_31810 | k141_31810_29 | 48722 | 50686 | - | CE19 |
| CAZyme | k141_31810 | k141_31810_30 | 50687 | 52024 | - | GH28 |
| CAZyme | k141_31810 | k141_31810_31 | 52095 | 54947 | - | CBM67 | GH78 |
| CAZyme | k141_31810 | k141_31810_32 | 54995 | 58324 | - | GH142 | GH143 |
| CAZyme | k141_31810 | k141_31810_33 | 58345 | 59274 | - | GH43_18 |
| pfam | k141_31810 | k141_31810_34 | 59507 | 60175 | - | DUF3826 |
| CAZyme | k141_31810 | k141_31810_35 | 60247 | 61986 | - | PL1_2 |
| pfam | k141_31810 | k141_31810_36 | 62645 | 64849 | - | SusD_RagB | SusD-like_3 |
| TC | k141_31810 | k141_31810_37 | 64862 | 68215 | - | 1.B.14.6.1 |
| pfam | k141_31810 | k141_31810_38 | 68283 | 69707 | - | DUF4957 | DUF4992 | DUF5123 |
| pfam | k141_31810 | k141_31810_39 | 69956 | 70846 | - | AP_endonuc_2 |
| CAZyme | k141_31810 | k141_31810_40 | 71147 | 73417 | - | GH92 |
| CAZyme | k141_31810 | k141_31810_41 | 73425 | 74393 | - | GH130_2 |
| pfam | k141_31810 | k141_31810_42 | 74446 | 75777 | - | MFS_1 | MFS_1 |
| CAZyme | k141_31810 | k141_31810_43 | 75876 | 78080 | - | GH163 |
Gene ID: k141_31810_29
Type: CAZyme
Location: 48722 - 50686 (-)
Type: CAZyme
Location: 48722 - 50686 (-)
Gene ID: k141_31810_30
Type: CAZyme
Location: 50687 - 52024 (-)
Type: CAZyme
Location: 50687 - 52024 (-)
Gene ID: k141_31810_31
Type: CAZyme
Location: 52095 - 54947 (-)
Type: CAZyme
Location: 52095 - 54947 (-)
Gene ID: k141_31810_32
Type: CAZyme
Location: 54995 - 58324 (-)
Type: CAZyme
Location: 54995 - 58324 (-)
Gene ID: k141_31810_33
Type: CAZyme
Location: 58345 - 59274 (-)
Type: CAZyme
Location: 58345 - 59274 (-)
Gene ID: k141_31810_34
Type: pfam
Location: 59507 - 60175 (-)
Type: pfam
Location: 59507 - 60175 (-)
Gene ID: k141_31810_35
Type: CAZyme
Location: 60247 - 61986 (-)
Type: CAZyme
Location: 60247 - 61986 (-)
Gene ID: k141_31810_36
Type: pfam
Location: 62645 - 64849 (-)
Type: pfam
Location: 62645 - 64849 (-)
Gene ID: k141_31810_37
Type: TC
Location: 64862 - 68215 (-)
Type: TC
Location: 64862 - 68215 (-)
Gene ID: k141_31810_38
Type: pfam
Location: 68283 - 69707 (-)
Type: pfam
Location: 68283 - 69707 (-)
Gene ID: k141_31810_39
Type: pfam
Location: 69956 - 70846 (-)
Type: pfam
Location: 69956 - 70846 (-)
Gene ID: k141_31810_40
Type: CAZyme
Location: 71147 - 73417 (-)
Type: CAZyme
Location: 71147 - 73417 (-)
Gene ID: k141_31810_41
Type: CAZyme
Location: 73425 - 74393 (-)
Type: CAZyme
Location: 73425 - 74393 (-)
Gene ID: k141_31810_42
Type: pfam
Location: 74446 - 75777 (-)
Type: pfam
Location: 74446 - 75777 (-)
Gene ID: k141_31810_43
Type: CAZyme
Location: 75876 - 78080 (-)
Type: CAZyme
Location: 75876 - 78080 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.