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Cluster: CGMR079934_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_32150 k141_32150_37 29160 30347 - GT4
CAZyme k141_32150 k141_32150_38 30347 31504 - GT4
NULL(UNKNOWN) k141_32150 k141_32150_39 31501 32751 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_32150 k141_32150_40 32748 34241 - 2.A.66.1.40
pfam k141_32150 k141_32150_41 35034 36356 - UDPG_MGDP_dh | 3HCDH_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC k141_32150 k141_32150_42 36392 38818 - 8.A.3.3.4
TC k141_32150 k141_32150_43 38829 39662 - 1.B.18.3.3
TC k141_32150 k141_32150_44 39677 41608 - 9.B.18.2.1
Gene ID: k141_32150_37
Type: CAZyme
Location: 29160 - 30347 (-)
Gene ID: k141_32150_38
Type: CAZyme
Location: 30347 - 31504 (-)
Gene ID: k141_32150_39
Type:
Location: 31501 - 32751 (-)
Gene ID: k141_32150_40
Type: TC
Location: 32748 - 34241 (-)
Gene ID: k141_32150_41
Type: pfam
Location: 35034 - 36356 (-)
Gene ID: k141_32150_42
Type: TC
Location: 36392 - 38818 (-)
Gene ID: k141_32150_43
Type: TC
Location: 38829 - 39662 (-)
Gene ID: k141_32150_44
Type: TC
Location: 39677 - 41608 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_32150_41 vegan > omnivore 2.64595 0.03046

🧭 Explore Read Mapping of CGC

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