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Cluster: CGMR079934_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_22410 k141_22410_7 7025 8158 + GT4
NULL(UNKNOWN) k141_22410 k141_22410_8 8172 9362 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_22410 k141_22410_9 9364 10437 + GT4
CAZyme k141_22410 k141_22410_10 10514 11509 + GT2
NULL(UNKNOWN) k141_22410 k141_22410_11 11540 12802 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_22410 k141_22410_12 12852 13688 + GT2
TC k141_22410 k141_22410_13 13870 14523 + 9.B.18.1.2
pfam k141_22410 k141_22410_14 14555 15832 + DegT_DnrJ_EryC1 | DegT_DnrJ_EryC1
NULL(UNKNOWN) k141_22410 k141_22410_15 15857 15967 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_22410 k141_22410_16 16009 16803 + 1.B.18.3.3
TC k141_22410 k141_22410_17 16816 19254 + 8.A.3.3.4
Gene ID: k141_22410_7
Type: CAZyme
Location: 7025 - 8158 (+)
Gene ID: k141_22410_8
Type:
Location: 8172 - 9362 (+)
Gene ID: k141_22410_9
Type: CAZyme
Location: 9364 - 10437 (+)
Gene ID: k141_22410_10
Type: CAZyme
Location: 10514 - 11509 (+)
Gene ID: k141_22410_11
Type:
Location: 11540 - 12802 (+)
Gene ID: k141_22410_12
Type: CAZyme
Location: 12852 - 13688 (+)
Gene ID: k141_22410_13
Type: TC
Location: 13870 - 14523 (+)
Gene ID: k141_22410_14
Type: pfam
Location: 14555 - 15832 (+)
Gene ID: k141_22410_15
Type:
Location: 15857 - 15967 (+)
Gene ID: k141_22410_16
Type: TC
Location: 16009 - 16803 (+)
Gene ID: k141_22410_17
Type: TC
Location: 16816 - 19254 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_22410_15 vegan > omnivore 1.55061 0.04227

🧭 Explore Read Mapping of CGC

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