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Cluster: CGMR079934_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_4046 k141_4046_33 40558 44883 + 2.A.6.1.2
pfam k141_4046 k141_4046_34 44918 45811 + HlyD_3 | HlyD_D23
TC k141_4046 k141_4046_35 45830 46891 + 9.B.33.1.2
TF k141_4046 k141_4046_36 46888 47691 + LytTR
CAZyme k141_4046 k141_4046_37 47780 50119 - GH92
pfam k141_4046 k141_4046_38 50131 50925 - BSP
CAZyme k141_4046 k141_4046_39 50955 53294 - GH92
CAZyme k141_4046 k141_4046_40 53301 55586 - GH92
Gene ID: k141_4046_33
Type: TC
Location: 40558 - 44883 (+)
Gene ID: k141_4046_34
Type: pfam
Location: 44918 - 45811 (+)
Gene ID: k141_4046_35
Type: TC
Location: 45830 - 46891 (+)
Gene ID: k141_4046_36
Type: TF
Location: 46888 - 47691 (+)
Gene ID: k141_4046_37
Type: CAZyme
Location: 47780 - 50119 (-)
Gene ID: k141_4046_38
Type: pfam
Location: 50131 - 50925 (-)
Gene ID: k141_4046_39
Type: CAZyme
Location: 50955 - 53294 (-)
Gene ID: k141_4046_40
Type: CAZyme
Location: 53301 - 55586 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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