Cluster: CGMR079934_CGC41
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR079934
- CGC Family ID: CGCFAM_00363
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4046 | k141_4046_2 | 536 | 1504 | - | 1.A.34.1.3 |
| pfam | k141_4046 | k141_4046_3 | 1612 | 4230 | + | tRNA-synt_2c | DHHA1 | tRNA_SAD |
| NULL(UNKNOWN) | k141_4046 | k141_4046_4 | 4459 | 4782 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_4046 | k141_4046_5 | 4876 | 7077 | + | GH92 |
| TF | k141_4046 | k141_4046_6 | 7095 | 7649 | + | GerE |
| STP | k141_4046 | k141_4046_7 | 7702 | 8697 | + | FecR |
| CAZyme | k141_4046 | k141_4046_8 | 8694 | 11003 | + | GH92 |
| CAZyme | k141_4046 | k141_4046_9 | 11035 | 13302 | + | GH92 |
| pfam | k141_4046 | k141_4046_10 | 13474 | 13908 | + | DUF6078 |
| pfam | k141_4046 | k141_4046_11 | 14179 | 15513 | - | F5_F8_type_C | DUF4989 | F5_F8_type_C_2 |
| CAZyme | k141_4046 | k141_4046_12 | 15595 | 17022 | - | GH18 |
| pfam | k141_4046 | k141_4046_13 | 17056 | 18210 | - | BT_3987-like_N | Laminin_G_3 |
| pfam | k141_4046 | k141_4046_14 | 18219 | 19295 | - | GH18_BT1044-like |
| TC | k141_4046 | k141_4046_15 | 19320 | 20933 | - | 8.A.46.2.2 |
| TC | k141_4046 | k141_4046_16 | 20950 | 24357 | - | 1.B.14.6.13 |
Gene ID: k141_4046_2
Type: TC
Location: 536 - 1504 (-)
Type: TC
Location: 536 - 1504 (-)
Gene ID: k141_4046_3
Type: pfam
Location: 1612 - 4230 (+)
Type: pfam
Location: 1612 - 4230 (+)
Gene ID: k141_4046_4
Type:
Location: 4459 - 4782 (-)
Type:
Location: 4459 - 4782 (-)
Gene ID: k141_4046_5
Type: CAZyme
Location: 4876 - 7077 (+)
Type: CAZyme
Location: 4876 - 7077 (+)
Gene ID: k141_4046_6
Type: TF
Location: 7095 - 7649 (+)
Type: TF
Location: 7095 - 7649 (+)
Gene ID: k141_4046_7
Type: STP
Location: 7702 - 8697 (+)
Type: STP
Location: 7702 - 8697 (+)
Gene ID: k141_4046_8
Type: CAZyme
Location: 8694 - 11003 (+)
Type: CAZyme
Location: 8694 - 11003 (+)
Gene ID: k141_4046_9
Type: CAZyme
Location: 11035 - 13302 (+)
Type: CAZyme
Location: 11035 - 13302 (+)
Gene ID: k141_4046_10
Type: pfam
Location: 13474 - 13908 (+)
Type: pfam
Location: 13474 - 13908 (+)
Gene ID: k141_4046_11
Type: pfam
Location: 14179 - 15513 (-)
Type: pfam
Location: 14179 - 15513 (-)
Gene ID: k141_4046_12
Type: CAZyme
Location: 15595 - 17022 (-)
Type: CAZyme
Location: 15595 - 17022 (-)
Gene ID: k141_4046_13
Type: pfam
Location: 17056 - 18210 (-)
Type: pfam
Location: 17056 - 18210 (-)
Gene ID: k141_4046_14
Type: pfam
Location: 18219 - 19295 (-)
Type: pfam
Location: 18219 - 19295 (-)
Gene ID: k141_4046_15
Type: TC
Location: 19320 - 20933 (-)
Type: TC
Location: 19320 - 20933 (-)
Gene ID: k141_4046_16
Type: TC
Location: 20950 - 24357 (-)
Type: TC
Location: 20950 - 24357 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.