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Cluster: CGMR079934_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_13132 k141_13132_11 10083 11261 - PL13
pfam k141_13132 k141_13132_12 11397 11948 - DUF4738
TF k141_13132 k141_13132_13 12078 15626 + HTH_AraC
CAZyme k141_13132 k141_13132_14 15742 18384 + GH147
TC k141_13132 k141_13132_15 18439 21414 + 1.B.14.6.1
TC k141_13132 k141_13132_16 21434 23011 + 8.A.46.1.1
pfam k141_13132 k141_13132_17 23035 24777 + SusE | DUF5111 | DUF5114
CAZyme k141_13132 k141_13132_18 24801 25889 + GH53
CAZyme k141_13132 k141_13132_19 25960 28401 + GH2
Gene ID: k141_13132_11
Type: CAZyme
Location: 10083 - 11261 (-)
Gene ID: k141_13132_12
Type: pfam
Location: 11397 - 11948 (-)
Gene ID: k141_13132_13
Type: TF
Location: 12078 - 15626 (+)
Gene ID: k141_13132_14
Type: CAZyme
Location: 15742 - 18384 (+)
Gene ID: k141_13132_15
Type: TC
Location: 18439 - 21414 (+)
Gene ID: k141_13132_16
Type: TC
Location: 21434 - 23011 (+)
Gene ID: k141_13132_17
Type: pfam
Location: 23035 - 24777 (+)
Gene ID: k141_13132_18
Type: CAZyme
Location: 24801 - 25889 (+)
Gene ID: k141_13132_19
Type: CAZyme
Location: 25960 - 28401 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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