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Cluster: CGMR079934_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_1917 k141_1917_19 28808 30385 - GH30_4
CAZyme k141_1917 k141_1917_20 30434 32356 - GH97
CAZyme k141_1917 k141_1917_21 32495 33835 - CBM32
pfam k141_1917 k141_1917_22 33856 35871 - SusD_RagB | SusD-like_3
TC k141_1917 k141_1917_23 35904 39050 - 1.B.14.6.1
NULL(UNKNOWN) k141_1917 k141_1917_24 39171 39278 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_1917 k141_1917_25 39275 43390 + HTH_AraC
CAZyme k141_1917 k141_1917_26 43469 44431 - GH18
Gene ID: k141_1917_19
Type: CAZyme
Location: 28808 - 30385 (-)
Gene ID: k141_1917_20
Type: CAZyme
Location: 30434 - 32356 (-)
Gene ID: k141_1917_21
Type: CAZyme
Location: 32495 - 33835 (-)
Gene ID: k141_1917_22
Type: pfam
Location: 33856 - 35871 (-)
Gene ID: k141_1917_23
Type: TC
Location: 35904 - 39050 (-)
Gene ID: k141_1917_24
Type:
Location: 39171 - 39278 (+)
Gene ID: k141_1917_25
Type: TF
Location: 39275 - 43390 (+)
Gene ID: k141_1917_26
Type: CAZyme
Location: 43469 - 44431 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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