Cluster: CGMR079934_CGC20
🧬 Cluster Details
- Gene Count: 26
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR079934
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_5434 | k141_5434_18 | 18120 | 19937 | + | GH43_24 |
| peptidase | k141_5434 | k141_5434_19 | 21067 | 21882 | + | M15.UPD |
| pfam | k141_5434 | k141_5434_20 | 21918 | 23108 | + | Thump_like | PG_1098_Fer |
| CAZyme | k141_5434 | k141_5434_21 | 23304 | 25895 | - | GH3 |
| TF | k141_5434 | k141_5434_22 | 26437 | 27048 | - | GerE |
| STP | k141_5434 | k141_5434_23 | 27171 | 28115 | + | FecR |
| TC | k141_5434 | k141_5434_24 | 28171 | 31557 | + | 1.B.14.6.1 |
| pfam | k141_5434 | k141_5434_25 | 31570 | 33501 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_5434 | k141_5434_26 | 33540 | 34436 | + | CBM32 |
| CAZyme | k141_5434 | k141_5434_27 | 34445 | 37348 | + | CBM32 |
| TC | k141_5434 | k141_5434_28 | 37549 | 40365 | + | 1.B.14.12.1 |
| pfam | k141_5434 | k141_5434_29 | 40533 | 41465 | + | Metallophos |
| NULL(UNKNOWN) | k141_5434 | k141_5434_30 | 41434 | 41634 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_5434 | k141_5434_31 | 41609 | 43459 | - | 1.A.23.1.4 |
| CAZyme | k141_5434 | k141_5434_32 | 43635 | 45809 | - | GH36 |
| pfam | k141_5434 | k141_5434_33 | 46009 | 47505 | - | BT_3987-like_N | BT_3987-like_N |
| pfam | k141_5434 | k141_5434_34 | 47527 | 49494 | - | SusD_RagB | SusD-like_3 |
| TC | k141_5434 | k141_5434_35 | 49516 | 52659 | - | 1.B.14.6.1 |
| CAZyme | k141_5434 | k141_5434_36 | 53474 | 55999 | - | GH31_15 |
| STP | k141_5434 | k141_5434_37 | 56200 | 56808 | + | Sigma70_r4_2 |
| STP | k141_5434 | k141_5434_38 | 56850 | 57884 | + | FecR |
| TC | k141_5434 | k141_5434_39 | 58073 | 61441 | + | 1.B.14.6.1 |
| pfam | k141_5434 | k141_5434_40 | 61466 | 63127 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_5434 | k141_5434_41 | 63144 | 64106 | + | GH43_18 |
| NULL(UNKNOWN) | k141_5434 | k141_5434_42 | 64126 | 64251 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_5434 | k141_5434_43 | 64444 | 65427 | + | 2.A.19.5.2 |
Gene ID: k141_5434_18
Type: CAZyme
Location: 18120 - 19937 (+)
Type: CAZyme
Location: 18120 - 19937 (+)
Gene ID: k141_5434_19
Type: peptidase
Location: 21067 - 21882 (+)
Type: peptidase
Location: 21067 - 21882 (+)
Gene ID: k141_5434_20
Type: pfam
Location: 21918 - 23108 (+)
Type: pfam
Location: 21918 - 23108 (+)
Gene ID: k141_5434_21
Type: CAZyme
Location: 23304 - 25895 (-)
Type: CAZyme
Location: 23304 - 25895 (-)
Gene ID: k141_5434_22
Type: TF
Location: 26437 - 27048 (-)
Type: TF
Location: 26437 - 27048 (-)
Gene ID: k141_5434_23
Type: STP
Location: 27171 - 28115 (+)
Type: STP
Location: 27171 - 28115 (+)
Gene ID: k141_5434_24
Type: TC
Location: 28171 - 31557 (+)
Type: TC
Location: 28171 - 31557 (+)
Gene ID: k141_5434_25
Type: pfam
Location: 31570 - 33501 (+)
Type: pfam
Location: 31570 - 33501 (+)
Gene ID: k141_5434_26
Type: CAZyme
Location: 33540 - 34436 (+)
Type: CAZyme
Location: 33540 - 34436 (+)
Gene ID: k141_5434_27
Type: CAZyme
Location: 34445 - 37348 (+)
Type: CAZyme
Location: 34445 - 37348 (+)
Gene ID: k141_5434_28
Type: TC
Location: 37549 - 40365 (+)
Type: TC
Location: 37549 - 40365 (+)
Gene ID: k141_5434_29
Type: pfam
Location: 40533 - 41465 (+)
Type: pfam
Location: 40533 - 41465 (+)
Gene ID: k141_5434_30
Type:
Location: 41434 - 41634 (+)
Type:
Location: 41434 - 41634 (+)
Gene ID: k141_5434_31
Type: TC
Location: 41609 - 43459 (-)
Type: TC
Location: 41609 - 43459 (-)
Gene ID: k141_5434_32
Type: CAZyme
Location: 43635 - 45809 (-)
Type: CAZyme
Location: 43635 - 45809 (-)
Gene ID: k141_5434_33
Type: pfam
Location: 46009 - 47505 (-)
Type: pfam
Location: 46009 - 47505 (-)
Gene ID: k141_5434_34
Type: pfam
Location: 47527 - 49494 (-)
Type: pfam
Location: 47527 - 49494 (-)
Gene ID: k141_5434_35
Type: TC
Location: 49516 - 52659 (-)
Type: TC
Location: 49516 - 52659 (-)
Gene ID: k141_5434_36
Type: CAZyme
Location: 53474 - 55999 (-)
Type: CAZyme
Location: 53474 - 55999 (-)
Gene ID: k141_5434_37
Type: STP
Location: 56200 - 56808 (+)
Type: STP
Location: 56200 - 56808 (+)
Gene ID: k141_5434_38
Type: STP
Location: 56850 - 57884 (+)
Type: STP
Location: 56850 - 57884 (+)
Gene ID: k141_5434_39
Type: TC
Location: 58073 - 61441 (+)
Type: TC
Location: 58073 - 61441 (+)
Gene ID: k141_5434_40
Type: pfam
Location: 61466 - 63127 (+)
Type: pfam
Location: 61466 - 63127 (+)
Gene ID: k141_5434_41
Type: CAZyme
Location: 63144 - 64106 (+)
Type: CAZyme
Location: 63144 - 64106 (+)
Gene ID: k141_5434_42
Type:
Location: 64126 - 64251 (+)
Type:
Location: 64126 - 64251 (+)
Gene ID: k141_5434_43
Type: TC
Location: 64444 - 65427 (+)
Type: TC
Location: 64444 - 65427 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_5434_36 | vegan > omnivore | 1.20533 | 0.01990 |