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Cluster: CGMR079934_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_13962 k141_13962_153 243115 244854 - CE12 | CE8
CAZyme k141_13962 k141_13962_154 244895 245863 - CE8
CAZyme k141_13962 k141_13962_155 245873 247072 - GH105
TC k141_13962 k141_13962_156 247374 248771 + 4.A.5.1.4
pfam k141_13962 k141_13962_157 248805 249725 + KduI
NULL(UNKNOWN) k141_13962 k141_13962_158 249751 249900 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_13962 k141_13962_159 249984 251501 + 2.A.1.14.25
pfam k141_13962 k141_13962_160 251872 255258 - DEAD | ResIII | AAA_11 | AAA_11 | AAA_12 | AAA_19 | AAA_30
TC k141_13962 k141_13962_161 255327 256145 - 2.A.64.1.2
Gene ID: k141_13962_153
Type: CAZyme
Location: 243115 - 244854 (-)
Gene ID: k141_13962_154
Type: CAZyme
Location: 244895 - 245863 (-)
Gene ID: k141_13962_155
Type: CAZyme
Location: 245873 - 247072 (-)
Gene ID: k141_13962_156
Type: TC
Location: 247374 - 248771 (+)
Gene ID: k141_13962_157
Type: pfam
Location: 248805 - 249725 (+)
Gene ID: k141_13962_158
Type:
Location: 249751 - 249900 (-)
Gene ID: k141_13962_159
Type: TC
Location: 249984 - 251501 (+)
Gene ID: k141_13962_160
Type: pfam
Location: 251872 - 255258 (-)
Gene ID: k141_13962_161
Type: TC
Location: 255327 - 256145 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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