Cluster: CGMR079934_CGC14
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate: host glycan
- Genome ID: CGMR079934
- CGC Family ID: CGCFAM_00720
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_13962 | k141_13962_2 | 202 | 1461 | + | GH109 |
| CAZyme | k141_13962 | k141_13962_3 | 1493 | 3340 | + | GH110 |
| STP | k141_13962 | k141_13962_4 | 3409 | 3954 | - | Sigma70_r2 | Sigma70_r4_2 |
| STP | k141_13962 | k141_13962_5 | 4301 | 5239 | + | FecR |
| TC | k141_13962 | k141_13962_6 | 5290 | 8643 | + | 1.B.14.6.1 |
| pfam | k141_13962 | k141_13962_7 | 8704 | 10590 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_13962 | k141_13962_8 | 10627 | 11919 | + | BT_3987-like_N |
| CAZyme | k141_13962 | k141_13962_9 | 11997 | 14570 | + | CBM32 |
| CAZyme | k141_13962 | k141_13962_10 | 14804 | 16207 | + | GH109 |
| TC | k141_13962 | k141_13962_11 | 16280 | 17206 | + | 2.A.115.1.1 |
| CAZyme | k141_13962 | k141_13962_12 | 17293 | 20604 | + | GH2 |
| pfam | k141_13962 | k141_13962_13 | 20633 | 21727 | + | APH |
| pfam | k141_13962 | k141_13962_14 | 21755 | 22405 | - | DUF3256 |
| TC | k141_13962 | k141_13962_15 | 22416 | 23315 | - | 2.A.7.3.57 |
Gene ID: k141_13962_2
Type: CAZyme
Location: 202 - 1461 (+)
Type: CAZyme
Location: 202 - 1461 (+)
Gene ID: k141_13962_3
Type: CAZyme
Location: 1493 - 3340 (+)
Type: CAZyme
Location: 1493 - 3340 (+)
Gene ID: k141_13962_4
Type: STP
Location: 3409 - 3954 (-)
Type: STP
Location: 3409 - 3954 (-)
Gene ID: k141_13962_5
Type: STP
Location: 4301 - 5239 (+)
Type: STP
Location: 4301 - 5239 (+)
Gene ID: k141_13962_6
Type: TC
Location: 5290 - 8643 (+)
Type: TC
Location: 5290 - 8643 (+)
Gene ID: k141_13962_7
Type: pfam
Location: 8704 - 10590 (+)
Type: pfam
Location: 8704 - 10590 (+)
Gene ID: k141_13962_8
Type: pfam
Location: 10627 - 11919 (+)
Type: pfam
Location: 10627 - 11919 (+)
Gene ID: k141_13962_9
Type: CAZyme
Location: 11997 - 14570 (+)
Type: CAZyme
Location: 11997 - 14570 (+)
Gene ID: k141_13962_10
Type: CAZyme
Location: 14804 - 16207 (+)
Type: CAZyme
Location: 14804 - 16207 (+)
Gene ID: k141_13962_11
Type: TC
Location: 16280 - 17206 (+)
Type: TC
Location: 16280 - 17206 (+)
Gene ID: k141_13962_12
Type: CAZyme
Location: 17293 - 20604 (+)
Type: CAZyme
Location: 17293 - 20604 (+)
Gene ID: k141_13962_13
Type: pfam
Location: 20633 - 21727 (+)
Type: pfam
Location: 20633 - 21727 (+)
Gene ID: k141_13962_14
Type: pfam
Location: 21755 - 22405 (-)
Type: pfam
Location: 21755 - 22405 (-)
Gene ID: k141_13962_15
Type: TC
Location: 22416 - 23315 (-)
Type: TC
Location: 22416 - 23315 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.