Cluster: CGMR079777_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR079777
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_315597 | k141_315597_1 | 1 | 1941 | - | GH13_9 |
| pfam | k141_315597 | k141_315597_2 | 3403 | 3666 | + | Ribosomal_S20p |
| pfam | k141_315597 | k141_315597_3 | 3788 | 4867 | + | GcpE |
| TC | k141_315597 | k141_315597_4 | 4907 | 5488 | - | 2.A.107.1.2 |
| NULL(UNKNOWN) | k141_315597 | k141_315597_5 | 5783 | 6022 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_315597 | k141_315597_6 | 6057 | 9419 | - | 3.A.17.1.1 |
Gene ID: k141_315597_1
Type: CAZyme
Location: 1 - 1941 (-)
Type: CAZyme
Location: 1 - 1941 (-)
Gene ID: k141_315597_2
Type: pfam
Location: 3403 - 3666 (+)
Type: pfam
Location: 3403 - 3666 (+)
Gene ID: k141_315597_3
Type: pfam
Location: 3788 - 4867 (+)
Type: pfam
Location: 3788 - 4867 (+)
Gene ID: k141_315597_4
Type: TC
Location: 4907 - 5488 (-)
Type: TC
Location: 4907 - 5488 (-)
Gene ID: k141_315597_5
Type:
Location: 5783 - 6022 (+)
Type:
Location: 5783 - 6022 (+)
Gene ID: k141_315597_6
Type: TC
Location: 6057 - 9419 (-)
Type: TC
Location: 6057 - 9419 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Sharpea
Species
Sharpea porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.