Cluster: CGMR079777_CGC31
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR079777
- CGC Family ID: CGCFAM_02317
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_13177 | k141_13177_23 | 25146 | 27032 | - | 3.A.3.6.10 |
| STP | k141_13177 | k141_13177_24 | 27047 | 27262 | - | HMA |
| TF | k141_13177 | k141_13177_25 | 27274 | 27567 | - | HTH_5 |
| TC | k141_13177 | k141_13177_26 | 27666 | 28139 | - | 4.A.1.1.1 |
| TF | k141_13177 | k141_13177_27 | 28224 | 29012 | + | HTH_6 |
| TF | k141_13177 | k141_13177_28 | 29005 | 29727 | + | HTH_6 |
| TC | k141_13177 | k141_13177_29 | 29740 | 31263 | - | 4.A.1.1.3 |
| CAZyme | k141_13177 | k141_13177_30 | 31285 | 32610 | - | GH4 |
Gene ID: k141_13177_23
Type: TC
Location: 25146 - 27032 (-)
Type: TC
Location: 25146 - 27032 (-)
Gene ID: k141_13177_24
Type: STP
Location: 27047 - 27262 (-)
Type: STP
Location: 27047 - 27262 (-)
Gene ID: k141_13177_25
Type: TF
Location: 27274 - 27567 (-)
Type: TF
Location: 27274 - 27567 (-)
Gene ID: k141_13177_26
Type: TC
Location: 27666 - 28139 (-)
Type: TC
Location: 27666 - 28139 (-)
Gene ID: k141_13177_27
Type: TF
Location: 28224 - 29012 (+)
Type: TF
Location: 28224 - 29012 (+)
Gene ID: k141_13177_28
Type: TF
Location: 29005 - 29727 (+)
Type: TF
Location: 29005 - 29727 (+)
Gene ID: k141_13177_29
Type: TC
Location: 29740 - 31263 (-)
Type: TC
Location: 29740 - 31263 (-)
Gene ID: k141_13177_30
Type: CAZyme
Location: 31285 - 32610 (-)
Type: CAZyme
Location: 31285 - 32610 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Sharpea
Species
Sharpea porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.