Cluster: CGMR079777_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: galactan
- Genome ID: CGMR079777
- CGC Family ID: CGCFAM_00067
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_334502 | k141_334502_12 | 7846 | 9114 | + | 3.A.1.1.28 |
| TC | k141_334502 | k141_334502_13 | 9133 | 10005 | + | 3.A.1.1.28 |
| TC | k141_334502 | k141_334502_14 | 10005 | 10835 | + | 3.A.1.1.28 |
| CAZyme | k141_334502 | k141_334502_15 | 10868 | 13054 | + | GH36 |
| TC | k141_334502 | k141_334502_16 | 13041 | 14147 | + | 3.A.1.1.20 |
Gene ID: k141_334502_12
Type: TC
Location: 7846 - 9114 (+)
Type: TC
Location: 7846 - 9114 (+)
Gene ID: k141_334502_13
Type: TC
Location: 9133 - 10005 (+)
Type: TC
Location: 9133 - 10005 (+)
Gene ID: k141_334502_14
Type: TC
Location: 10005 - 10835 (+)
Type: TC
Location: 10005 - 10835 (+)
Gene ID: k141_334502_15
Type: CAZyme
Location: 10868 - 13054 (+)
Type: CAZyme
Location: 10868 - 13054 (+)
Gene ID: k141_334502_16
Type: TC
Location: 13041 - 14147 (+)
Type: TC
Location: 13041 - 14147 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Sharpea
Species
Sharpea porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.