Cluster: CGMR079777_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: CGMR079777
- CGC Family ID: CGCFAM_00010
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_375148 | k141_375148_4 | 2219 | 4159 | + | GH133 |
| TC | k141_375148 | k141_375148_5 | 4246 | 5355 | + | 3.A.1.1.22 |
| NULL(UNKNOWN) | k141_375148 | k141_375148_6 | 6016 | 6243 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_375148 | k141_375148_7 | 6895 | 8313 | - | GH77 |
| CAZyme | k141_375148 | k141_375148_8 | 8321 | 10585 | - | GT35 |
Gene ID: k141_375148_4
Type: CAZyme
Location: 2219 - 4159 (+)
Type: CAZyme
Location: 2219 - 4159 (+)
Gene ID: k141_375148_5
Type: TC
Location: 4246 - 5355 (+)
Type: TC
Location: 4246 - 5355 (+)
Gene ID: k141_375148_6
Type:
Location: 6016 - 6243 (-)
Type:
Location: 6016 - 6243 (-)
Gene ID: k141_375148_7
Type: CAZyme
Location: 6895 - 8313 (-)
Type: CAZyme
Location: 6895 - 8313 (-)
Gene ID: k141_375148_8
Type: CAZyme
Location: 8321 - 10585 (-)
Type: CAZyme
Location: 8321 - 10585 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Sharpea
Species
Sharpea porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.