Cluster: CGMR079777_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: CGMR079777
- CGC Family ID: CGCFAM_00176
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_343808 | k141_343808_24 | 21308 | 22675 | - | 4.A.3.2.8 |
| TC | k141_343808 | k141_343808_25 | 22713 | 23036 | - | 4.A.3.2.5 |
| TC | k141_343808 | k141_343808_26 | 23039 | 23362 | - | 4.A.3.2.2 |
| pfam | k141_343808 | k141_343808_27 | 23449 | 23982 | - | RDD |
| TF | k141_343808 | k141_343808_28 | 23983 | 25872 | - | HTH_11 | Mga |
| CAZyme | k141_343808 | k141_343808_29 | 26052 | 27485 | - | CE20 |
Gene ID: k141_343808_24
Type: TC
Location: 21308 - 22675 (-)
Type: TC
Location: 21308 - 22675 (-)
Gene ID: k141_343808_25
Type: TC
Location: 22713 - 23036 (-)
Type: TC
Location: 22713 - 23036 (-)
Gene ID: k141_343808_26
Type: TC
Location: 23039 - 23362 (-)
Type: TC
Location: 23039 - 23362 (-)
Gene ID: k141_343808_27
Type: pfam
Location: 23449 - 23982 (-)
Type: pfam
Location: 23449 - 23982 (-)
Gene ID: k141_343808_28
Type: TF
Location: 23983 - 25872 (-)
Type: TF
Location: 23983 - 25872 (-)
Gene ID: k141_343808_29
Type: CAZyme
Location: 26052 - 27485 (-)
Type: CAZyme
Location: 26052 - 27485 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Sharpea
Species
Sharpea porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.