Cluster: CGMR079777_CGC25
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR079777
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_148811 | k141_148811_24 | 16807 | 17649 | + | 8.A.5.1.6 |
| pfam | k141_148811 | k141_148811_25 | 17672 | 18835 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| pfam | k141_148811 | k141_148811_26 | 18851 | 19585 | + | CMD |
| CAZyme | k141_148811 | k141_148811_27 | 19839 | 21914 | + | GH13_4 |
| pfam | k141_148811 | k141_148811_28 | 21911 | 22729 | + | Hydrolase_3 |
| TC | k141_148811 | k141_148811_29 | 22793 | 24661 | + | 4.A.1.2.1 |
| STP | k141_148811 | k141_148811_30 | 24713 | 24970 | + | PTS-HPr |
| STP | k141_148811 | k141_148811_31 | 25134 | 27170 | + | EAL | GGDEF |
| TC | k141_148811 | k141_148811_32 | 27163 | 28524 | + | 9.B.34.1.4 |
| CAZyme | k141_148811 | k141_148811_33 | 28683 | 31094 | + | GH39 |
| pfam | k141_148811 | k141_148811_34 | 31259 | 32176 | + | AP_endonuc_2 |
| CAZyme | k141_148811 | k141_148811_35 | 32188 | 33234 | + | GH179 |
Gene ID: k141_148811_24
Type: TC
Location: 16807 - 17649 (+)
Type: TC
Location: 16807 - 17649 (+)
Gene ID: k141_148811_25
Type: pfam
Location: 17672 - 18835 (+)
Type: pfam
Location: 17672 - 18835 (+)
Gene ID: k141_148811_26
Type: pfam
Location: 18851 - 19585 (+)
Type: pfam
Location: 18851 - 19585 (+)
Gene ID: k141_148811_27
Type: CAZyme
Location: 19839 - 21914 (+)
Type: CAZyme
Location: 19839 - 21914 (+)
Gene ID: k141_148811_28
Type: pfam
Location: 21911 - 22729 (+)
Type: pfam
Location: 21911 - 22729 (+)
Gene ID: k141_148811_29
Type: TC
Location: 22793 - 24661 (+)
Type: TC
Location: 22793 - 24661 (+)
Gene ID: k141_148811_30
Type: STP
Location: 24713 - 24970 (+)
Type: STP
Location: 24713 - 24970 (+)
Gene ID: k141_148811_31
Type: STP
Location: 25134 - 27170 (+)
Type: STP
Location: 25134 - 27170 (+)
Gene ID: k141_148811_32
Type: TC
Location: 27163 - 28524 (+)
Type: TC
Location: 27163 - 28524 (+)
Gene ID: k141_148811_33
Type: CAZyme
Location: 28683 - 31094 (+)
Type: CAZyme
Location: 28683 - 31094 (+)
Gene ID: k141_148811_34
Type: pfam
Location: 31259 - 32176 (+)
Type: pfam
Location: 31259 - 32176 (+)
Gene ID: k141_148811_35
Type: CAZyme
Location: 32188 - 33234 (+)
Type: CAZyme
Location: 32188 - 33234 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Sharpea
Species
Sharpea porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.