Cluster: CGMR079777_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: CGMR079777
- CGC Family ID: CGCFAM_00106
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_225095 | k141_225095_2 | 848 | 2119 | + | 4.A.3.2.2 |
| CAZyme | k141_225095 | k141_225095_3 | 2119 | 3756 | + | GH5_46 |
| pfam | k141_225095 | k141_225095_4 | 3924 | 5165 | + | SBP_bac_1 | SBP_bac_8 |
| TC | k141_225095 | k141_225095_5 | 5230 | 6606 | + | 3.A.1.1.27 |
| TC | k141_225095 | k141_225095_6 | 6606 | 7478 | + | 3.A.1.1.27 |
Gene ID: k141_225095_2
Type: TC
Location: 848 - 2119 (+)
Type: TC
Location: 848 - 2119 (+)
Gene ID: k141_225095_3
Type: CAZyme
Location: 2119 - 3756 (+)
Type: CAZyme
Location: 2119 - 3756 (+)
Gene ID: k141_225095_4
Type: pfam
Location: 3924 - 5165 (+)
Type: pfam
Location: 3924 - 5165 (+)
Gene ID: k141_225095_5
Type: TC
Location: 5230 - 6606 (+)
Type: TC
Location: 5230 - 6606 (+)
Gene ID: k141_225095_6
Type: TC
Location: 6606 - 7478 (+)
Type: TC
Location: 6606 - 7478 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Sharpea
Species
Sharpea porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.