Cluster: CGMR079777_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR079777
- CGC Family ID: CGCFAM_05785
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_223432 | k141_223432_3 | 1761 | 2369 | + | 2.A.87.1.3 |
| STP | k141_223432 | k141_223432_4 | 2488 | 3816 | + | ACT |
| TC | k141_223432 | k141_223432_5 | 3921 | 6929 | + | 3.A.3.5.15 |
| pfam | k141_223432 | k141_223432_6 | 6929 | 7192 | + | Trns_repr_metal |
| CAZyme | k141_223432 | k141_223432_7 | 7323 | 8747 | + | GH13_5 |
Gene ID: k141_223432_3
Type: TC
Location: 1761 - 2369 (+)
Type: TC
Location: 1761 - 2369 (+)
Gene ID: k141_223432_4
Type: STP
Location: 2488 - 3816 (+)
Type: STP
Location: 2488 - 3816 (+)
Gene ID: k141_223432_5
Type: TC
Location: 3921 - 6929 (+)
Type: TC
Location: 3921 - 6929 (+)
Gene ID: k141_223432_6
Type: pfam
Location: 6929 - 7192 (+)
Type: pfam
Location: 6929 - 7192 (+)
Gene ID: k141_223432_7
Type: CAZyme
Location: 7323 - 8747 (+)
Type: CAZyme
Location: 7323 - 8747 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Sharpea
Species
Sharpea porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.