Cluster: CGMR079777_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR079777
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_27550 | k141_27550_12 | 6624 | 11435 | + | CBM32 | GH36 |
| CAZyme | k141_27550 | k141_27550_13 | 11517 | 13136 | + | GH13_31 |
| pfam | k141_27550 | k141_27550_14 | 13535 | 14272 | + | SnoaL | SnoaL_2 |
| STP | k141_27550 | k141_27550_15 | 14282 | 14896 | + | Fer4 | Fer4 |
| TC | k141_27550 | k141_27550_16 | 14893 | 16428 | + | 3.A.1.12.8 |
| TC | k141_27550 | k141_27550_17 | 16437 | 17213 | + | 3.A.1.12.4 |
Gene ID: k141_27550_12
Type: CAZyme
Location: 6624 - 11435 (+)
Type: CAZyme
Location: 6624 - 11435 (+)
Gene ID: k141_27550_13
Type: CAZyme
Location: 11517 - 13136 (+)
Type: CAZyme
Location: 11517 - 13136 (+)
Gene ID: k141_27550_14
Type: pfam
Location: 13535 - 14272 (+)
Type: pfam
Location: 13535 - 14272 (+)
Gene ID: k141_27550_15
Type: STP
Location: 14282 - 14896 (+)
Type: STP
Location: 14282 - 14896 (+)
Gene ID: k141_27550_16
Type: TC
Location: 14893 - 16428 (+)
Type: TC
Location: 14893 - 16428 (+)
Gene ID: k141_27550_17
Type: TC
Location: 16437 - 17213 (+)
Type: TC
Location: 16437 - 17213 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Sharpea
Species
Sharpea porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.