Cluster: CGMR079777_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR079777
- CGC Family ID: CGCFAM_07008
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_58782 | k141_58782_13 | 15414 | 17318 | - | 3.A.1.135.5 |
| TC | k141_58782 | k141_58782_14 | 17318 | 19060 | - | 3.A.1.135.5 |
| TF | k141_58782 | k141_58782_15 | 19057 | 19518 | - | MarR |
| pfam | k141_58782 | k141_58782_16 | 19638 | 20477 | - | S6PP | Hydrolase_3 |
| CAZyme | k141_58782 | k141_58782_17 | 20562 | 21386 | - | CE1 |
Gene ID: k141_58782_13
Type: TC
Location: 15414 - 17318 (-)
Type: TC
Location: 15414 - 17318 (-)
Gene ID: k141_58782_14
Type: TC
Location: 17318 - 19060 (-)
Type: TC
Location: 17318 - 19060 (-)
Gene ID: k141_58782_15
Type: TF
Location: 19057 - 19518 (-)
Type: TF
Location: 19057 - 19518 (-)
Gene ID: k141_58782_16
Type: pfam
Location: 19638 - 20477 (-)
Type: pfam
Location: 19638 - 20477 (-)
Gene ID: k141_58782_17
Type: CAZyme
Location: 20562 - 21386 (-)
Type: CAZyme
Location: 20562 - 21386 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Sharpea
Species
Sharpea porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.